RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CAB39Q9Y376 341 aaPredicted RBP13.04□□□□□ -0.32
DDX55-202ENST00000354291 OR6C6A6NF89 314 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 SEMG1P04279 462 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 VSIG10L2P0DP72 767 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 RAC2P15153 192 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 SLC6A6P31641 620 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 IFNGR2P38484 337 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 CENPAP49450 140 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 EFNB2P52799 333 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 HOXA4Q00056 320 aaPredicted RBP13.03□□□□□ -0.32
DDX55-202ENST00000354291 SPIBQ01892 262 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 EMX1Q04741 257 aaPredicted RBP13.03□□□□□ -0.32
DDX55-202ENST00000354291 CD69Q07108 199 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 RFX4Q33E94 735 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 CCDC92Q53HC0 331 aaPredicted RBP13.03□□□□□ -0.32
DDX55-202ENST00000354291 ZBTB37Q5TC79 503 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
DDX55-202ENST00000354291 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
DDX55-202ENST00000354291 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 PPP1R35Q8TAP8 253 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 NSMCE2Q96MF7 247 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 CDRT15Q96T59 188 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 NDE1Q9NXR1 346 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 PTTG3PQ9NZH4 202 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 ZNRD1Q9P1U0 126 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 CTSZQ9UBR2 303 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 CD300AQ9UGN4 299 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 POLR1DQ9Y2S0 133 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 V9GYQ6 96 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 RYR2Q92736 4967 aa13.03□□□□□ -0.32
DDX55-202ENST00000354291 A0A1W2PRD5 423 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 A0A1W2PRF3 423 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 A0A1W2PRM7 423 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 ARPC3O15145 178 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 RER1O15258 196 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 ADAM20O43506 726 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 IDH3BO43837 385 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 OR10H3O60404 316 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 RENP00797 406 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 FABP3P05413 133 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 IGLL1P15814 213 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 FPR3P25089 353 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 PRB3Q04118 309 aaPredicted RBP13.02□□□□□ -0.33
DDX55-202ENST00000354291 SPATS1Q496A3 300 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 VMO1Q7Z5L0 202 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 SPERTQ8NA61 448 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 BHLHE23Q8NDY6 225 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 OR11L1Q8NGX0 322 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 FANK1Q8TC84 345 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 SLC7A6Q92536 515 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 OR52D1Q9H346 318 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 IL1RAPQ9NPH3 570 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 DNAJB11Q9UBS4 358 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 TAGLN3Q9UI15 199 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 ARL2BPQ9Y2Y0 163 aa13.02□□□□□ -0.33
DDX55-202ENST00000354291 ARPC2O15144 300 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 MLNRO43193 412 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 PPP1R3DO95685 299 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 NOS3P29474 1203 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 MSX2P35548 267 aaPredicted RBP13.01□□□□□ -0.33
DDX55-202ENST00000354291 KIR2DS4P43632 304 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 HIST1H3AP68431 136 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 HIST2H3PS2Q5TEC6 136 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 OTPQ5XKR4 325 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 C11orf88Q6PI97 169 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 C16orf89Q6UX73 402 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 HIST2H3AQ71DI3 136 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 BTN2A1Q7KYR7 527 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 OR5R1Q8NH85 324 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 APOBEC3DQ96AK3 386 aaPredicted RBP13.01□□□□□ -0.33
DDX55-202ENST00000354291 TSSK2Q96PF2 358 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 NMNAT3Q96T66 252 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 COQ7Q99807 217 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 IFT27Q9BW83 186 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 HDHD2Q9H0R4 259 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 CNTD2Q9H8S5 307 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 SMURF1Q9HCE7 757 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 SRA1Q9HD15 236 aaKnown RBP13.01□□□□□ -0.33
DDX55-202ENST00000354291 UFSP2Q9NUQ7 469 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 B9D1Q9UPM9 204 aa13.01□□□□□ -0.33
DDX55-202ENST00000354291 IGLV1-36A0A0B4J1U3 117 aa13□□□□□ -0.33
DDX55-202ENST00000354291 DCTN6O00399 190 aa13□□□□□ -0.33
DDX55-202ENST00000354291 DCTN3O75935 186 aa13□□□□□ -0.33
DDX55-202ENST00000354291 KRT36O76013 467 aa13□□□□□ -0.33
DDX55-202ENST00000354291 PAHP00439 452 aa13□□□□□ -0.33
DDX55-202ENST00000354291 DBHP09172 617 aa13□□□□□ -0.33
DDX55-202ENST00000354291 HIST1H1CP16403 213 aaKnown RBP13□□□□□ -0.33
DDX55-202ENST00000354291 RRM2P31350 389 aa13□□□□□ -0.33
DDX55-202ENST00000354291 MNAT1P51948 309 aa13□□□□□ -0.33
DDX55-202ENST00000354291 KCNJ8Q15842 424 aa13□□□□□ -0.33
DDX55-202ENST00000354291 SLC36A3Q495N2 470 aa13□□□□□ -0.33
DDX55-202ENST00000354291 FBXW12Q6X9E4 464 aa13□□□□□ -0.33
DDX55-202ENST00000354291 OR6V1Q8N148 313 aa13□□□□□ -0.33
DDX55-202ENST00000354291 OR4F17Q8NGA8 305 aa13□□□□□ -0.33
DDX55-202ENST00000354291 OR4C13Q8NGP0 309 aa13□□□□□ -0.33
DDX55-202ENST00000354291 OR2T6Q8NHC8 308 aa13□□□□□ -0.33
DDX55-202ENST00000354291 GNPDA2Q8TDQ7 276 aa13□□□□□ -0.33
DDX55-202ENST00000354291 OR4F4Q96R69 305 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms