RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 OR13C8Q8NGS7 320 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 NIPSNAP3BQ9BS92 247 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 ADAM19Q9H013 955 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 NCBP2LA6PVI3 153 aaKnown RBP15.58■□□□□ 0.08
SHANK1-201ENST00000293441 GPX5O75715 221 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 BAMBIQ13145 260 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 OR10K2Q6IF99 312 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 ADAT1Q9BUB4 502 aaKnown RBP15.58■□□□□ 0.08
SHANK1-201ENST00000293441 JAM3Q9BX67 310 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 SEMG1P04279 462 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 HNF1AP20823 631 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 BMP5P22003 454 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 FABP5Q01469 135 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 LRRC10Q5BKY1 277 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 TMEM268Q5VZI3 342 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 FAM219BQ5XKK7 198 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 CORO2AQ92828 525 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 ORAI1Q96D31 301 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 HRH1P35367 487 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 TSEN54Q7Z6J9 526 aaKnown RBP15.58■□□□□ 0.08
SHANK1-201ENST00000293441 CMTM4Q8IZR5 234 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 OR10R2Q8NGX6 335 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 DLL4Q9NR61 685 aa15.58■□□□□ 0.08
SHANK1-201ENST00000293441 CDK5R1Q15078 307 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 BAGE3Q86Y29 109 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 BAGE2Q86Y30 109 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 KIAA1551Q9HCM1 1747 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 ALG1L2C9J202 215 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 PAX6P26367 422 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 GP2P55259 537 aaKnown RBP15.57■□□□□ 0.08
SHANK1-201ENST00000293441 ZNF816Q0VGE8 651 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-201ENST00000293441 OR4D9Q8NGE8 314 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 TERB2Q8NHR7 220 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 CTSVO60911 334 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 SLC51BQ86UW2 128 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 OR1F12Q8NHA8 337 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 ZNF391Q9UJN7 358 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 MN1Q10571 1320 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-201ENST00000293441 NDUFB3O43676 98 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 SBK3P0C264 359 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 ADRA2CP18825 462 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 EPHA8P29322 1005 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-201ENST00000293441 AQP6Q13520 282 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 SYS1Q8N2H4 156 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 APOBEC3DQ96AK3 386 aaPredicted RBP15.57■□□□□ 0.08
SHANK1-201ENST00000293441 DTYMKP23919 212 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 ZNF117Q03924 483 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 TCTN1Q2MV58 587 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 BTLAQ7Z6A9 289 aa15.57■□□□□ 0.08
SHANK1-201ENST00000293441 CROCCQ5TZA2 2017 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 TRGV10A0A0A0MS01 117 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 PEX11BO96011 259 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 CRYBA1P05813 215 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 CBR1P16152 277 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 ACER2Q5QJU3 275 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 OR10AD1Q8NGE0 317 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 TAAR6Q96RI8 345 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 FUT6P51993 359 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 MPPED2Q15777 294 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 ZNF793Q6ZN11 406 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 KCNRGQ8N5I3 272 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 GALMQ96C23 342 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 C19orf43Q9BQ61 176 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 HSPB2A8KAH6 182 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 RAE1P78406 368 aaKnown RBP15.56■□□□□ 0.08
SHANK1-201ENST00000293441 HSPB2Q16082 182 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 GPBAR1Q8TDU6 330 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 MITD1Q8WV92 249 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 CXorf51AA0A1B0GTR3 108 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 LINC01387J3KSC0 135 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 ATF1P18846 271 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 ADGRG3Q86Y34 549 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 SLC7A6Q92536 515 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 CDCA4Q9BXL8 241 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 MED9Q9NWA0 146 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 OR2G2Q8NGZ5 317 aa15.56■□□□□ 0.08
SHANK1-201ENST00000293441 MGMTP16455 207 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 PTBP1P26599 531 aaKnown RBP eCLIP15.55■□□□□ 0.08
SHANK1-201ENST00000293441 RNPS1Q15287 305 aaKnown RBP15.55■□□□□ 0.08
SHANK1-201ENST00000293441 TMEM230Q96A57 120 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 AK3Q9UIJ7 227 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 NME2P1O60361 137 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 TGM1P22735 817 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 NXPH1P58417 271 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 YBX1P67809 324 aaKnown RBP15.55■□□□□ 0.08
SHANK1-201ENST00000293441 AMER3Q8N944 861 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 OR10P1Q8NGE3 313 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 SOX7Q9BT81 388 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 PPP1CAP62136 330 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 C20orf24Q9BUV8 137 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 CHST6Q9GZX3 395 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 BARX1Q9HBU1 254 aaPredicted RBP15.55■□□□□ 0.08
SHANK1-201ENST00000293441 LRP12Q9Y561 859 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 MYO7AQ13402 2215 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 PAPPAQ13219 1627 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 PPIHO43447 177 aaKnown RBP15.55■□□□□ 0.08
SHANK1-201ENST00000293441 FZD5Q13467 585 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 CD276Q5ZPR3 534 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 C16orf47Q6ZP98 133 aaPredicted RBP15.55■□□□□ 0.08
SHANK1-201ENST00000293441 PLPPR2Q96GM1 343 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms