RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PBOV1Q9GZY1 135 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 BRD7Q9NPI1 651 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 TUBG2Q9NRH3 451 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 OR52A1Q9UKL2 312 aa17.09■□□□□ 0.33
PDLIM2-221ENST00000622702 A0A1W2PPR1 153 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 SHISA9B4DS77 424 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 LCKP06239 509 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 FAM157BP0CG42 384 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 CCR9P51686 369 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 GTF2A1P52655 376 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 NANOS3P60323 173 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 SNTB2Q13425 540 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 MED22Q15528 200 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 UBE2UQ5VVX9 321 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 XAF1Q6GPH4 301 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 ADAM5Q6NVV9 412 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF544Q6NX49 715 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 RPL22L1Q6P5R6 122 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF367Q7RTV3 350 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 PRSS35Q8N3Z0 413 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 OR8B12Q8NGG6 310 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 RPS4Y2Q8TD47 263 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 FCGR1BQ92637 280 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 NRGNQ92686 78 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 PGAM5Q96HS1 289 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 ISYNA1Q9NPH2 558 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF319Q9P2F9 582 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 ST6GALNAC2Q9UJ37 374 aa17.08■□□□□ 0.32
PDLIM2-221ENST00000622702 C5orf63A6NC05 138 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 OGG1O15527 345 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 SMIM18P0DKX4 95 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 GLRXP35754 106 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 PPP1CBP62140 327 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 ALKBH1Q13686 389 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 CDK5R1Q15078 307 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 WDR38Q5JTN6 314 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 BCL2L15Q5TBC7 163 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 ELMOD2Q8IZ81 293 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 KBTBD8Q8NFY9 601 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 OR5L1Q8NGL2 311 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 OR10A2Q9H208 303 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 OR51B6Q9H340 312 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 FRRS1LQ9P0K9 344 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 STARD10Q9Y365 291 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 N6AMT1Q9Y5N5 214 aa17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 ANKRD17O75179 2603 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-221ENST00000622702 A0A0U1RQV5 110 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 XRCC2O43543 280 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 TTRP02766 147 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 RPSAP08865 295 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 KIR3DL2P43630 455 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 RPS23P62266 143 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 KCTD8Q6ZWB6 473 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 OR1J1Q8NGS3 322 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 PPP1R14AQ96A00 147 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 RGCCQ9H4X1 137 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 PLEKHF2Q9H8W4 249 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 GTF2A1LQ9UNN4 478 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 SLC22A13Q9Y226 551 aa17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 SIRT4Q9Y6E7 314 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-221ENST00000622702 OR4C45A6NMZ5 311 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 H3BSA7 217 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 TBX1O43435 398 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 PLAUP00749 431 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 MLLT11Q13015 90 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 MALLQ13021 153 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 DMKNQ6E0U4 476 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF704Q6ZNC4 412 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 TMEM171Q8WVE6 324 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 SPSB4Q96A44 273 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 SGK3Q96BR1 496 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 SMIM19Q96E16 107 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 MGLLQ99685 303 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 LIME1Q9H400 295 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF442Q9H7R0 627 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 CA10Q9NS85 328 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF391Q9UJN7 358 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 POU2F3Q9UKI9 436 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 ATP23Q9Y6H3 246 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 SPG11Q96JI7 2443 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 TRBV2A0A0J9YWF9 115 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 GPRIN2O60269 458 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 IGLV3-1P01715 115 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 ATP6V1B1P15313 513 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 GLYATL3Q5SZD4 288 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 SLC25A40Q8TBP6 338 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 MARS2Q96GW9 593 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 POFUT1Q9H488 388 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 OPA3Q9H6K4 179 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 VCX3AQ9NNX9 186 aa17.05■□□□□ 0.32
PDLIM2-221ENST00000622702 TMEM212A6NML5 194 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 PLPP2O43688 288 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 ATE1O95260 518 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 CD1AP06126 327 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 UBCP0CG48 685 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 CFL1P23528 166 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 ERVS71-1P61550 626 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF92Q03936 586 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 GPR50Q13585 617 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 TPBGQ13641 420 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms