RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 XIAPP98170 497 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 SPANXN2Q5MJ10 180 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 ADNP2Q6IQ32 1131 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 BZW1Q7L1Q6 419 aaKnown RBP2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 FAM9CQ8IZT9 166 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 NPWQ8N729 165 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 SLC35G3Q8N808 338 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 OR5M1Q8NGP8 315 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 KCNG3Q8TAE7 436 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 FAM81AQ8TBF8 368 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 NRBF2Q96F24 287 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 CDX2Q99626 313 aaPredicted RBP2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 CHP1Q99653 195 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 RBBP8Q99708 897 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 IQCGQ9H095 443 aaKnown RBP2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 EDA2RQ9HAV5 297 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 KIF27Q86VH2 1401 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 NINLQ9Y2I6 1382 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 LOC100506127A0A0U1RQW1 187 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 LOC100653049A0A140TA62 436 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 LYRM9A8MSI8 78 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 GOLGA8TH3BQL2 631 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 RDH16O75452 317 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 KRT34O76011 436 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 H6PDO95479 791 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 TSPAN13O95857 204 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 NDUFB10O96000 172 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 LGALS3P17931 250 aaKnown RBP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 PRKACBP22694 351 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 PSMB5P28074 263 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 HNRNPH3P31942 346 aaKnown RBP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 NAA10P41227 235 aaPredicted RBP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 BCAP31P51572 246 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 GFERP55789 205 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 RPS11P62280 158 aaKnown RBP eCLIP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 BAMBIQ13145 260 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 KLHL40Q2TBA0 621 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 Q3ZCU0 254 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 LIN9Q5TKA1 542 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 EIF3MQ7L2H7 374 aaKnown RBP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF101Q8IZC7 436 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 COMMD1Q8N668 190 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 OR5B3Q8NH48 314 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 LRRC29Q8WV35 223 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 ANP32BQ92688 251 aaKnown RBP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 TMEM230Q96A57 120 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 MCUR1Q96AQ8 359 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 OR5B12Q96R08 314 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 GGTLC1Q9BX51 225 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 RACGAP1Q9H0H5 632 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 ZSCAN16Q9H4T2 348 aaPredicted RBP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 TMEM185BQ9H7F4 350 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF160Q9HCG1 818 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 TMEM9BQ9NQ34 198 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 LZTFL1Q9NQ48 299 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 SAMSN1Q9NSI8 373 aaKnown RBP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 C21orf62Q9NYP8 219 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 AHSPQ9NZD4 102 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 PTTG3PQ9NZH4 202 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 SIGLEC7Q9Y286 467 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 CSDC2Q9Y534 153 aaKnown RBP2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF407Q9C0G0 2248 aa2.15□□□□□ -2.07
SCAMP1-205ENST00000614488 TSPOAP1O95153 1857 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 USP47Q96K76 1375 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 IGHV3-72A0A0B4J1Y9 119 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF879B4DU55 563 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 KRBOX1C9JBD0 128 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 RAB29O14966 203 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 FKBP6O75344 327 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 TGM6O95932 706 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 CYB5R3P00387 301 aaPredicted RBP2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 EIF4EP06730 217 aaKnown RBP2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 CRYGCP07315 174 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 CRYGBP07316 175 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 IVLP07476 585 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 TROVE2P10155 538 aaKnown RBP eCLIP2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 ATF6P18850 670 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 GGT1P19440 569 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 PTNP21246 168 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 PRLHRP49683 370 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 TMED10P49755 219 aaKnown RBP2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 MERTKQ12866 999 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 ILKQ13418 452 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 PGGHGQ32M88 737 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 XKR7Q5GH72 579 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 TEX30Q5JUR7 227 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 CCDC122Q5T0U0 273 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 GPR107Q5VW38 600 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 GUSBP11Q6P575 273 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 RNASEKQ6P5S7 137 aaKnown RBP2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 SASS6Q6UVJ0 657 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 LUZP2Q86TE4 346 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 CSGALNACT2Q8N6G5 542 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 PRELID2Q8N945 189 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 CHST4Q8NCG5 386 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 ITFG2Q969R8 447 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 CHCHD7Q9BUK0 85 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 AUNIPQ9H7T9 357 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 GEMIN7Q9H840 131 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms