RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 SLC22A31A6NKX4 558 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 CLDN25C9JDP6 229 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 E9PQ18 207 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 MLNRO43193 412 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 PPIHO43447 177 aaKnown RBP12.24□□□□□ -0.45
MKS1-207ENST00000578789 XRCC2O43543 280 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 H2BFMP0C1H6 154 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 TNFRSF1AP19438 455 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 IL2RGP31785 369 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 ZNF92Q03936 586 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 MEPCEQ7L2J0 689 aaKnown RBP12.24□□□□□ -0.45
MKS1-207ENST00000578789 BCDIN3DQ7Z5W3 292 aaKnown RBP12.24□□□□□ -0.45
MKS1-207ENST00000578789 GID4Q8IVV7 300 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 PQLC1Q8N2U9 271 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 OR2AE1Q8NHA4 323 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 POM121Q96HA1 1249 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 CNN2Q99439 309 aaKnown RBP12.24□□□□□ -0.45
MKS1-207ENST00000578789 SP140LQ9H930 580 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 HAO2Q9NYQ3 351 aa12.24□□□□□ -0.45
MKS1-207ENST00000578789 ANK3Q12955 4377 aaKnown RBP12.23□□□□□ -0.45
MKS1-207ENST00000578789 DYSFO75923 2080 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 CD300LBA8K4G0 201 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 ANXA2P07355 339 aaKnown RBP12.23□□□□□ -0.45
MKS1-207ENST00000578789 MRPL3P09001 348 aaKnown RBP12.23□□□□□ -0.45
MKS1-207ENST00000578789 RAD23AP54725 363 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 PRSS12P56730 875 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 ZNF121P58317 390 aaPredicted RBP12.23□□□□□ -0.45
MKS1-207ENST00000578789 PSMA6P60900 246 aaKnown RBP12.23□□□□□ -0.45
MKS1-207ENST00000578789 SLC3A1Q07837 685 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 CBR4Q8N4T8 237 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 BHLHE23Q8NDY6 225 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 OR10AD1Q8NGE0 317 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 OR52H1Q8NGJ2 320 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 OR8J1Q8NGP2 316 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 CLDND2Q8NHS1 167 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 THEM6Q8WUY1 208 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 ITLN1Q8WWA0 313 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 MSI2Q96DH6 328 aaKnown RBP12.23□□□□□ -0.45
MKS1-207ENST00000578789 MEGF10Q96KG7 1140 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 OR2V2Q96R30 315 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 IL4I1Q96RQ9 567 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 C9orf16Q9BUW7 83 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 NIPAL2Q9H841 368 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 ADGRL4Q9HBW9 690 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 YAE1D1Q9NRH1 226 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 TMEM160Q9NX00 188 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 LAMP5Q9UJQ1 280 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 COPS3Q9UNS2 423 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 WIPI2Q9Y4P8 454 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 ORC6Q9Y5N6 252 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 TMEM14AQ9Y6G1 99 aa12.23□□□□□ -0.45
MKS1-207ENST00000578789 MALRD1Q5VYJ5 2156 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 A8MV72 311 aaPredicted RBP12.22□□□□□ -0.45
MKS1-207ENST00000578789 WNT9BO14905 357 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 CDC42P60953 191 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 ROM1Q03395 351 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 DEGS2Q6QHC5 323 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 LRRN1Q6UXK5 716 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.22□□□□□ -0.45
MKS1-207ENST00000578789 CCL17Q92583 94 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 TIMD4Q96H15 378 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 HRASLS5Q96KN8 279 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 OR8B4Q96RC9 309 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 MNTQ99583 582 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 SLC22A4Q9H015 551 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 TMEM106BQ9NUM4 274 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 TMEM100Q9NV29 134 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 DNAJC27Q9NZQ0 273 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 H2AFY2Q9P0M6 372 aaPredicted RBP12.22□□□□□ -0.45
MKS1-207ENST00000578789 WARS2Q9UGM6 360 aaKnown RBP12.22□□□□□ -0.45
MKS1-207ENST00000578789 LRP12Q9Y561 859 aa12.22□□□□□ -0.45
MKS1-207ENST00000578789 hCG_38984A0A1B0GV85 526 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 PRR32B1ATL7 298 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 H0YL77 283 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 PHYHO14832 338 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 TBX1O43435 398 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 HTR1FP30939 366 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 DCTDP32321 178 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 CD200P41217 278 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 GATA4P43694 442 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 SRP9P49458 86 aaKnown RBP12.21□□□□□ -0.45
MKS1-207ENST00000578789 MMP16P51512 607 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 HCCSP53701 268 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 CDH15P55291 814 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 LMO4P61968 165 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 FAM3AP98173 230 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 TMED1Q13445 227 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 AVPI1Q5T686 147 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 FAM166AQ6J272 317 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 KCTD18Q6PI47 426 aaPredicted RBP12.21□□□□□ -0.45
MKS1-207ENST00000578789 FAM57BQ71RH2 274 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 KRT77Q7Z794 578 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 SLC35F2Q8IXU6 374 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 CELF2-AS1Q8N7Q2 184 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 OR56B2PQ8NGI1 322 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 FAM81AQ8TBF8 368 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 SPRYD4Q8WW59 207 aaPredicted RBP12.21□□□□□ -0.45
MKS1-207ENST00000578789 ASB17Q8WXJ9 295 aa12.21□□□□□ -0.45
MKS1-207ENST00000578789 RAB1CQ92928 201 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms