RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 LINC01590Q5TEZ4 76 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 HIST2H3AQ71DI3 136 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 SHFQ7M4L6 423 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 SLC16A9Q7RTY1 509 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 TIGD4Q8IY51 512 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ACBD4Q8NC06 268 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 BBS1Q8NFJ9 593 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 OR6K6Q8NGW6 343 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ASB17Q8WXJ9 295 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 OTULINQ96BN8 352 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 S100PBPQ96BU1 408 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 MUCL1Q96DR8 90 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 TSSK2Q96PF2 358 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 INTS14Q96SY0 518 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 CNN2Q99439 309 aaKnown RBP4.98□□□□□ -1.61
SCAF11-213ENST00000550629 THAP7Q9BT49 309 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-213ENST00000550629 DPCDQ9BVM2 203 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-213ENST00000550629 YIPF3Q9GZM5 350 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ACTR6Q9GZN1 396 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 OR51V1Q9H2C8 321 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 KCNN2Q9H2S1 579 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 C1orf198Q9H425 327 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 RERGLQ9H628 205 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 MED20Q9H944 212 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 NGBQ9NPG2 151 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 RASSF1Q9NS23 344 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 B3GNT2Q9NY97 397 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 NDRG3Q9UGV2 375 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 CYB5R1Q9UHQ9 305 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 RPL36Q9Y3U8 105 aaKnown RBP4.98□□□□□ -1.61
SCAF11-213ENST00000550629 TIMM10BQ9Y5J6 103 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 TMEM14AQ9Y6G1 99 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 COMMD3-BMI1R4GMX3 469 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 HIVEP3Q5T1R4 2406 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 NCOA6Q14686 2063 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CCDC182A6NF36 153 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 EFCAB10A6NFE3 127 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 TUBAL3A6NHL2 446 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 J3QRE1 110 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 AP4M1O00189 453 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 PHYHO14832 338 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 RAD51DO75771 328 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CLIC3O95833 236 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 PTHP01270 115 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 HLA-DQA2P01906 255 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 MMP7P09237 267 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SBK2P0C263 348 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CCDC159P0C7I6 412 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 OR2T7P0C7T2 308 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 COX5BP10606 129 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CLUP10909 449 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 DBTP11182 482 aaKnown RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 PIPP12273 146 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CBR1P16152 277 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CCKARP32238 428 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 CDAP32320 146 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ATP6V1E1P36543 226 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SLC15A1P46059 708 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ENTPD1P49961 510 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF81P51508 661 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 NUDT6P53370 316 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 FOXG1P55316 489 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF91Q05481 1191 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SRSF1Q07955 248 aaKnown RBP eCLIP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 FAM27E3Q08E93 113 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SCRN3Q0VDG4 424 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 MED21Q13503 144 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ENDOGQ14249 297 aaKnown RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 PPA1Q15181 289 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 TAB1Q15750 504 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ETFDHQ16134 617 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 GSG1Q2KHT4 349 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 HIKESHIQ53FT3 197 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 C6orf141Q5SZD1 244 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 KRT80Q6KB66 452 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SLC18B1Q6NT16 456 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 TMEM53Q6P2H8 277 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 DEGS2Q6QHC5 323 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SLC16A14Q7RTX9 510 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SKA3Q8IX90 412 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 WDR31Q8NA23 367 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 GJC3Q8NFK1 279 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 OR51L1Q8NGJ5 315 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 OR2AJ1Q8NGZ0 328 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 OR2T27Q8NH04 317 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 FAM222BQ8WU58 562 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 APH1BQ8WW43 257 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ZNRF4Q8WWF5 429 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 C11orf40Q8WZ69 217 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 SPSB4Q96A44 273 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ZMYND19Q96E35 227 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 FBXO17Q96EF6 278 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 RNFT2Q96EX2 444 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 MRPL48Q96GC5 212 aaKnown RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 DACH2Q96NX9 599 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 PRR25Q96S07 402 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF416Q9BWM5 594 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 YTHDF1Q9BYJ9 559 aaKnown RBP4.97□□□□□ -1.61
SCAF11-213ENST00000550629 OR2H1Q9GZK4 316 aa4.97□□□□□ -1.61
SCAF11-213ENST00000550629 HDHD2Q9H0R4 259 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms