RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 TMEM54Q969K7 222 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 SLC6A7Q99884 636 aa16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 ALX4Q9H161 411 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF107Q9UII5 783 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 FARSAQ9Y285 508 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-208ENST00000548436 A0A0J9YW62 118 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 EIF1BO60739 113 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 NOS1APO75052 506 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 CCL1P22362 96 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 GFOD2Q3B7J2 385 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 C10orf128Q5T292 105 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 NAA40Q86UY6 237 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF584Q8IVC4 421 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 ARMC10Q8N2F6 343 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 FAM109AQ8N4B1 249 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 BPIFB2Q8N4F0 458 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 CLEC4MQ9H2X3 399 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 OPN4Q9UHM6 478 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 MYO7BQ6PIF6 2116 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 TMEM82A0PJX8 343 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 TMEM14DPA8MWL7 114 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 NPIPA2E9PIF3 369 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 NPIPA3F8WFD2 350 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 GOSR2O14653 212 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 TNFSF11O14788 317 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 OR3A3P47888 321 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 LSM6P62312 80 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 GRB2P62993 217 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 SLC22A6Q4U2R8 563 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 DCAF12L2Q5VW00 463 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 THOC7Q6I9Y2 204 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 TRAPPC6BQ86SZ2 158 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 TMEM123Q8N131 208 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 GVQW1Q8N7I0 195 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 OR9K2Q8NGE7 335 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 PNPLA2Q96AD5 504 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 SLC25A21Q9BQT8 299 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 NELFAQ9H3P2 528 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 UPB1Q9UBR1 384 aa16.34■□□□□ 0.21
PRPF40B-208ENST00000548436 A0A0G2JMM0 328 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 A0A1W2PPB8 328 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 A0A1W2PRS3 328 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 KIR3DP1A8MWS1 328 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 LEUTXA8MZ59 168 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 CBR3O75828 277 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 STK17BO94768 372 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 ERCC1P07992 297 aaPredicted RBP16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 OR4E1P0C645 316 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 ZNF35P13682 527 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 GNB3P16520 340 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 MSR1P21757 451 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 Q0VFX4 171 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 IKZF1Q13422 519 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 ENDOGQ14249 297 aaKnown RBP16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 POU4F3Q15319 338 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 TCEAL6Q6IPX3 200 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 PPP1R32Q7Z5V6 425 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 OR13C8Q8NGS7 320 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 NUDCD2Q8WVJ2 157 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 TNFAIP8L1Q8WVP5 186 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 TCEAL3Q969E4 200 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 NABP1Q96AH0 204 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 ELMOD3Q96FG2 381 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 NICN1Q9BSH3 213 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 TMPRSS13Q9BYE2 586 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 FBLN5Q9UBX5 448 aa16.33■□□□□ 0.21
PRPF40B-208ENST00000548436 PCSK5Q92824 1860 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 B4E171 279 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 M0R233 179 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 VAMP5O95183 116 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 CSN2P05814 226 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 CTSSP25774 331 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 TSPAN7P41732 249 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 ZNF133P52736 654 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 RAC1P63000 192 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 OPCMLQ14982 345 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 NKPD1Q17RQ9 610 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 SCGB2B2Q4G0G5 96 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 ATPAF1Q5TC12 328 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 PGAP1Q75T13 922 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 TMED4Q7Z7H5 227 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 ZIC4Q8N9L1 334 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 TMEM41AQ96HV5 264 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 C1orf147Q96MC9 270 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 NAA11Q9BSU3 229 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 EDEM2Q9BV94 578 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 SRXN1Q9BYN0 137 aa16.33■□□□□ 0.2
PRPF40B-208ENST00000548436 DOCK10Q96BY6 2186 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 A0A0A6YYD4 124 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 PMS2P1A4D2B8 440 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 OR14I1A6ND48 311 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 OR5H15A6NDH6 313 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 GP1BAP07359 652 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 NR2C1P13056 603 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 NFYAP23511 347 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 ACP1P24666 158 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 OTX2P32243 289 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 OR3A4PP47883 348 aa16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 CSNK2A1P68400 391 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-208ENST00000548436 SIGLEC14Q08ET2 396 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms