RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 C19orf18Q8NEA5 215 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 GNPDA2Q8TDQ7 276 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SPTSSAQ969W0 71 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ZDHHC16Q969W1 377 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ZNF799Q96GE5 643 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MAP6Q96JE9 813 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CCT8L2Q96SF2 557 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 FN3KRPQ9HA64 309 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MRPL22Q9NWU5 206 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 RNF7Q9UBF6 113 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TAGLN3Q9UI15 199 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 NOTCH1P46531 2555 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MDFIC2A0A1B0GVS7 189 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 HOXA3O43365 443 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ENSAO43768 121 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 FABP3P05413 133 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CA6P23280 308 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 RRM2P31350 389 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PSMB10P40306 273 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 GSSP48637 474 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 NPY4RP50391 375 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 BPIFB3P59826 476 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TSPAN31Q12999 210 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 KCNJ8Q15842 424 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 DEFB112Q30KQ8 113 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SLC35F1Q5T1Q4 408 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 GPR157Q5UAW9 335 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 BRD3OSQ6XYD6 125 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ZNF620Q6ZNG0 422 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SPATC1Q76KD6 591 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TAF15Q92804 592 aaKnown RBP eCLIP16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TMIGD2Q96BF3 282 aa16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MMADHCQ9H3L0 296 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CD300LBA8K4G0 201 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 C22orf46C9J442 243 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 GMDSO60547 372 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 FAM107AO95990 144 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 HSD17B1P14061 328 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MDKP21741 143 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CD276Q5ZPR3 534 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PGAM4Q8N0Y7 254 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PROKR2Q8NFJ6 384 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 NSMCE2Q96MF7 247 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TECTBQ96PL2 329 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ADAT1Q9BUB4 502 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SLITRK2Q9H156 845 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PRDM13Q9H4Q3 707 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 NDE1Q9NXR1 346 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 FAM53CQ9NYF3 392 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ERVK-18Q9QC07 812 aa16.37■□□□□ 0.21
TNFRSF1B-204ENST00000536782 GGT3PA6NGU5 568 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 LGALS8O00214 317 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ZNF92Q03936 586 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SNAI3Q3KNW1 292 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SFRP4Q6FHJ7 346 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 RPL13AP3Q6NVV1 102 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PGBD2Q6P3X8 592 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TREML4Q6UXN2 200 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 BOLLQ8N9W6 283 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PLPP7Q8NBV4 271 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 OR52L1Q8NGH7 329 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 OR2T4Q8NH00 348 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PCGF1Q9BSM1 259 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 EGLN3Q9H6Z9 239 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 IL1RAPQ9NPH3 570 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ARL8BQ9NVJ2 186 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 KIF17Q9P2E2 1029 aa16.36■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SRRM5B3KS81 715 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ARPC2O15144 300 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PTBP3O95758 552 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 LIPFP07098 398 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 OMGP23515 440 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 OTX1P32242 354 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 PYCR1P32322 319 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MSX2P35548 267 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 RPS27P42677 84 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MNAT1P51948 309 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 HOXA4Q00056 320 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 OR8B8Q15620 311 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 DRAM2Q6UX65 266 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CYB561A3Q8NBI2 242 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 OR4C15Q8NGM1 316 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 OR2AE1Q8NHA4 323 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 NOX4Q9NPH5 578 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TRIM36Q9NQ86 728 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MRPL15Q9P015 296 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CTSZQ9UBR2 303 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MMP24Q9Y5R2 645 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CDH10Q9Y6N8 788 aa16.35■□□□□ 0.21
TNFRSF1B-204ENST00000536782 TVP23AA6NH52 213 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ZNF879B4DU55 563 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 C3orf80F5H4A9 247 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 P2RY10O00398 339 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 BHLHE40O14503 412 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 KRT36O76013 467 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CRYBA1P05813 215 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CFHR2P36980 270 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SPATS1Q496A3 300 aa16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 SAMD4BQ5PRF9 694 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1B-204ENST00000536782 GLYATL3Q5SZD4 288 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms