RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	UBTD1	Q9HAC8	227 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	FGF20	Q9NP95	211 aa	Predicted RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	TRIM36	Q9NQ86	728 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	LAMP5	Q9UJQ1	280 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	PURG	Q9UJV8	347 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	RAB26	Q9ULW5	256 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	DIMT1	Q9UNQ2	313 aa	Known RBP	4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	MPC1	Q9Y5U8	109 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	ATP23	Q9Y6H3	246 aa		4.35	□□□□□ -1.71
HDAC6-223	ENST00000480525	MALRD1	Q5VYJ5	2156 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	VPS13C	Q709C8	3753 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ABCA2	Q9BZC7	2435 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PPIAL4E	A0A075B759	164 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PPIAL4C	A0A0B4J2A2	164 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	hCG_38984	A0A1B0GV85	526 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	EFCAB10	A6NFE3	127 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMEM210	A6NLX4	147 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PPIAL4D	F5H284	164 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525		H0YHG0	523 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	GPRIN2	O60269	458 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	WBP4	O75554	376 aa	Known RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	BAG2	O95816	211 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	CST4	P01036	141 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	NGF	P01138	241 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	IGHV4-39	P01824	125 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	KRT8	P05787	483 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	GYPB	P06028	91 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	LCK	P06239	509 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	H2BFM	P0C1H6	154 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PATE4	P0C8F1	98 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	UBC	P0CG48	685 aa	Known RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PPIAL4F	P0DN26	164 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	MYF6	P23409	242 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	TNFSF4	P23510	183 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	POLR2I	P36954	125 aa	Known RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ERF	P50548	548 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	RIDA	P52758	137 aa	Known RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ART1	P52961	327 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ATP5J2	P56134	94 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	RPS7	P62081	194 aa	Known RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF91	Q05481	1191 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ACSM1	Q08AH1	577 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	FOXD4	Q12950	439 aa	Predicted RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PSG7	Q13046	419 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	RIN1	Q13671	783 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	EIF2B1	Q14232	305 aa	Known RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	GALE	Q14376	348 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	MEP1B	Q16820	701 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	KLHL12	Q53G59	568 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMEM42	Q69YG0	159 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	HIST2H2BC	Q6DN03	193 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	KRT80	Q6KB66	452 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PGAP1	Q75T13	922 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	THAP5	Q7Z6K1	395 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	KRT77	Q7Z794	578 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	LINC00346	Q8IVM7	164 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC35F2	Q8IXU6	374 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ELMOD2	Q8IZ81	293 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF283	Q8N7M2	679 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR52N1	Q8NH53	320 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	SLC25A40	Q8TBP6	338 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	C10orf105	Q8TEF2	133 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	APH1B	Q8WW43	257 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	RDH5	Q92781	318 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZMYND19	Q96E35	227 aa	Predicted RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ELMOD3	Q96FG2	381 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	COX4I2	Q96KJ9	171 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	ZNF649	Q9BS31	505 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	C1QTNF6	Q9BXI9	259 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR2J1	Q9GZK6	312 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	EGLN1	Q9GZT9	426 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	TLNRD1	Q9H1K6	362 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR10A2	Q9H208	303 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	OR51V1	Q9H2C8	321 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	SEBOX	Q9HB31	216 aa	Predicted RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	RHOF	Q9HBH0	211 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	FKBP14	Q9NWM8	211 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	TMEM160	Q9NX00	188 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	FAM206A	Q9NX38	181 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PLEKHA6	Q9Y2H5	1048 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	STARD10	Q9Y365	291 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	CAB39	Q9Y376	341 aa	Predicted RBP	4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	LRP12	Q9Y561	859 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	PCDHGB5	Q9Y5G0	923 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	SNX5	Q9Y5X3	404 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525		R4GMQ9	66 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525	DSCAML1	Q8TD84	2053 aa		4.34	□□□□□ -1.71
HDAC6-223	ENST00000480525		A0A096LNT2	108 aa		4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525	TMEM269	A0A1B0GVZ9	245 aa		4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525	TVP23A	A6NH52	213 aa		4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525	METTL15	A6NJ78	407 aa		4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525	OR5B21	A6NL26	309 aa		4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525	TMEM212	A6NML5	194 aa		4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525	CD300LB	A8K4G0	201 aa		4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525		F5H5K5	113 aa		4.33	□□□□□ -1.72
HDAC6-223	ENST00000480525	DENR	O43583	198 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms