RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SNRNP40Q96DI7 357 aaKnown RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 OR2M2Q96R28 347 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 TAAR6Q96RI8 345 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 NKX3-1Q99801 234 aaPredicted RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 PBOV1Q9GZY1 135 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 PNRC2Q9NPJ4 139 aaKnown RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 ING3Q9NXR8 418 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 NME2P1O60361 137 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 GSTT2BP0CG30 244 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 NME2P22392 152 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 HTR2CP28335 458 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 ZNF133P52736 654 aaPredicted RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 RAC1P63000 192 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 MRPS15P82914 257 aaKnown RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 TLE1Q04724 770 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 GTF3C1Q12789 2109 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 ESPL1Q14674 2120 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 SF3B4Q15427 424 aaKnown RBP eCLIP9.44□□□□□ -0.92e-6■■■□□ 16.7
PKP4-206ENST00000452162 GSG1Q2KHT4 349 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 C1orf100Q5SVJ3 147 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 OR6M1Q8NGM8 313 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 OR2AJ1Q8NGZ0 328 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 OR56B4Q8NH76 319 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 TMEM54Q969K7 222 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 TRAF4Q9BUZ4 470 aaPredicted RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 C20orf85Q9H1P6 137 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 CGGBP1Q9UFW8 167 aaPredicted RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 POLR1DQ9Y2S0 133 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 PHF3Q92576 2039 aaKnown RBP9.44□□□□□ -0.9
PKP4-206ENST00000452162 NCKAP5O14513 1909 aa9.44□□□□□ -0.9
PKP4-206ENST00000452162 IGHV3-15A0A0B4J1V0 119 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 A0A0J9YW62 118 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 LDLRAD4O15165 306 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 KDM4BO94953 1096 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 C1QBP02746 253 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 SRD5A2P31213 254 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 GZMKP49863 264 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 CSNK2A1P68400 391 aaPredicted RBP9.43□□□□□ -0.9
PKP4-206ENST00000452162 SPOCK1Q08629 439 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 MAB21L1Q13394 359 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 CDK10Q15131 360 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 FCN2Q15485 313 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 GLYATL3Q5SZD4 288 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 C10orf128Q5T292 105 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 RPUSD3Q6P087 351 aaKnown RBP9.43□□□□□ -0.9
PKP4-206ENST00000452162 FOXL2NBQ6ZUU3 175 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 TMEM178AQ8NBL3 297 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 CPT1CQ8TCG5 803 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 UCN2Q96RP3 112 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 PIGQQ9BRB3 760 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 NAA11Q9BSU3 229 aaPredicted RBP9.43□□□□□ -0.9
PKP4-206ENST00000452162 ACTR6Q9GZN1 396 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 OR51J1Q9H342 316 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 NIPAL2Q9H841 368 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 MOB1AQ9H8S9 216 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 DIABLOQ9NR28 239 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 DEPPQ9NTK1 212 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 ASF1BQ9NVP2 202 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 GLTPQ9NZD2 209 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 HELZ2Q9BYK8 2649 aaKnown RBP9.43□□□□□ -0.9
PKP4-206ENST00000452162 MED12Q93074 2177 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 A0A1B0GTI1 187 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 FAM172BPA6NC97 362 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 LRRC3CA6NJW4 275 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 H7C417 338 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 VAMP5O95183 116 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 P04436 131 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 NR2C1P13056 603 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 GABRA1P14867 456 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 CSNK1A1P48729 337 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 PHYHD1Q5SRE7 291 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 SFRP4Q6FHJ7 346 aaPredicted RBP9.43□□□□□ -0.9
PKP4-206ENST00000452162 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.43□□□□□ -0.9
PKP4-206ENST00000452162 CDH24Q86UP0 819 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 SULF2Q8IWU5 870 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 TMEM123Q8N131 208 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 NKAIN3Q8N8D7 197 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 OR9K2Q8NGE7 335 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 FGGYQ96C11 551 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 ZNF385AQ96PM9 386 aaKnown RBP9.43□□□□□ -0.9
PKP4-206ENST00000452162 SRXN1Q9BYN0 137 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 MED28Q9H204 178 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 ASH2LQ9UBL3 628 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 MTFP1Q9UDX5 166 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 KIAA1549Q9HCM3 1950 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 MYO18BQ8IUG5 2567 aa9.43□□□□□ -0.9
PKP4-206ENST00000452162 POLEQ07864 2286 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 PINLYPA6NC86 204 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 PYCARD-AS1I3L0S3 204 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 TNFSF11O14788 317 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 ALDOBP05062 364 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 PSMB1P20618 241 aaKnown RBP9.42□□□□□ -0.9
PKP4-206ENST00000452162 STOMP27105 288 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 ERP29P30040 261 aaKnown RBP9.42□□□□□ -0.9
PKP4-206ENST00000452162 BCL2A1Q16548 175 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 CD276Q5ZPR3 534 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 ZNF529Q6P280 563 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 ZIC4Q8N9L1 334 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 OR11H7Q8NGC8 314 aa9.42□□□□□ -0.9
PKP4-206ENST00000452162 OR1J2Q8NGS2 313 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms