RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ZNF14P17017 642 aaPredicted RBP11.9□□□□□ -0.5
VAPB-202ENST00000395802 MALLQ13021 153 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 MOGQ16653 247 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 ODF4Q2M2E3 257 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 RSPO1Q2MKA7 263 aaPredicted RBP11.9□□□□□ -0.5
VAPB-202ENST00000395802 FBXL19-AS1Q494R0 122 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 DOK3Q7L591 496 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 PRSS45Q7RTY3 260 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 LIX1LQ8IVB5 337 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 WDR31Q8NA23 367 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 OR8B12Q8NGG6 310 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 LILRB4Q8NHJ6 448 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 POM121L2Q96KW2 1035 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 MED18Q9BUE0 208 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 C1QTNF5Q9BXJ0 243 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 OPA3Q9H6K4 179 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 N6AMT1Q9Y5N5 214 aa11.9□□□□□ -0.5
VAPB-202ENST00000395802 TRBV5-5A0A0J9YX44 114 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 ZNF503-AS2A6NEH8 195 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 SLC2A1P11166 492 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 AGAP20933 346 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 TUBG1P23258 451 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 SOX6P35712 828 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 RPS11P62280 158 aaKnown RBP eCLIP11.89□□□□□ -0.51
VAPB-202ENST00000395802 FAM27E3Q08E93 113 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 PPA1Q15181 289 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 TSC22D1Q15714 1073 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 HSD17B12Q53GQ0 312 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 TPRA1Q86W33 373 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 ZNF584Q8IVC4 421 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 OR6Q1Q8NGQ2 317 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 MCFD2Q8NI22 146 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 SLC7A6Q92536 515 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 AKAP1Q92667 903 aaKnown RBP eCLIP11.89□□□□□ -0.514e-9■■■■■ 30.8
VAPB-202ENST00000395802 C10orf35Q96D05 121 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 CCDC120Q96HB5 630 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 OR14A2Q96R54 314 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 MMP27Q9H306 513 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 CDH20Q9HBT6 801 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 TBCCD1Q9NVR7 557 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 CRNNQ9UBG3 495 aaPredicted RBP11.89□□□□□ -0.51
VAPB-202ENST00000395802 SLC25A15Q9Y619 301 aa11.89□□□□□ -0.51
VAPB-202ENST00000395802 SMG1Q96Q15 3661 aaKnown RBP11.88□□□□□ -0.51
VAPB-202ENST00000395802 LOC107986453A0A1B0GWG9 222 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 DHRS7CA6NNS2 312 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 CDRT1O95170 752 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 CALRP27797 417 aaKnown RBP11.88□□□□□ -0.51
VAPB-202ENST00000395802 SDC2P34741 201 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 MTNR1BP49286 362 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 IDH3GP51553 393 aaPredicted RBP11.88□□□□□ -0.51
VAPB-202ENST00000395802 BMXP51813 675 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 UNQ9370/PRO34162Q6UXP9 181 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 NCCRP1Q6ZVX7 275 aaPredicted RBP11.88□□□□□ -0.51
VAPB-202ENST00000395802 CROCCP3Q8IVE0 287 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 RDH10Q8IZV5 341 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 OR13C3Q8NGS6 347 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 OR51E1Q8TCB6 317 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 TMEM106AQ96A25 262 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 SLC25A46Q96AG3 418 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 ZNF75AQ96N20 296 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 BARHL1Q9BZE3 327 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 PLEKHA1Q9HB21 404 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 KCNJ16Q9NPI9 418 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 LOC100509620A0A075B734 347 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 LOC390937A0A1W2PQ73 354 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 P2RY10O00398 339 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 CASKO14936 926 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 ICMTO60725 284 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 UCHL1P09936 223 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 CCL1P22362 96 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 GNLYP22749 145 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 PSMD7P51665 324 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 XKRXQ6PP77 449 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 COLCA1Q6ZS62 124 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 RNASE6Q93091 150 aaKnown RBP11.88□□□□□ -0.51
VAPB-202ENST00000395802 DERL3Q96Q80 235 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 KCNS3Q9BQ31 491 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 NOX3Q9HBY0 568 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 TCF7L1Q9HCS4 588 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 AKIP1Q9NQ31 210 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 GPR84Q9NQS5 396 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 SNTG1Q9NSN8 517 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 ESPL1Q14674 2120 aa11.88□□□□□ -0.51
VAPB-202ENST00000395802 NBASA2RRP1 2371 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 MYO7BQ6PIF6 2116 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 A0A1W2PR80 420 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 PDCD5O14737 125 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 DHRS3O75911 302 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 IGLV1-44P01699 117 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 SRMP19623 302 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 RAD52P43351 418 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 RANBP1P43487 201 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 RORCP51449 518 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 ADORA2A-AS1P86434 159 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 MXD1Q05195 221 aa11.87□□□□□ -0.51
VAPB-202ENST00000395802 GFOD2Q3B7J2 385 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms