RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 YIPF5Q969M3 257 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 THAP7Q9BT49 309 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-204ENST00000395454 CKLFQ9UBR5 152 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 GTF2A1LQ9UNN4 478 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 POLR1DQ9Y2S0 133 aa13.25□□□□□ -0.29
SCAF11-204ENST00000395454 MED12LQ86YW9 2145 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 MEGF11A6BM72 1044 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 LYRM1O43325 122 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 SULT1B1O43704 296 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 MAS1P04201 325 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 HNRNPCP07910 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCAF11-204ENST00000395454 PTGER4P35408 488 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 MADCAM1Q13477 382 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 MZT2BQ6NZ67 158 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 RPRMLQ8N4K4 120 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 DNAAF1Q8NEP3 725 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 SMIM4Q8WVI0 70 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 ULBP2Q9BZM5 246 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 PLEKHA1Q9HB21 404 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF275Q9NSD4 429 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-204ENST00000395454 CLCF1Q9UBD9 225 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 OSGIN2Q9Y236 505 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 FAM215AQ9Y5M1 114 aa13.24□□□□□ -0.29
SCAF11-204ENST00000395454 A0A1B0GTI1 187 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 RER1O15258 196 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 LANCL1O43813 399 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 IGLV3-1P01715 115 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 ITGA5P08648 1049 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 FCGR2AP12318 317 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 KIR2DL3P43628 341 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 C1orf185Q5T7R7 199 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 NSUN5P2Q63ZY6 315 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 RTL6Q6ICC9 239 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 DNM1P46Q6ZS02 220 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 GPR137CQ8N3F9 429 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 NKAIN3Q8N8D7 197 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 GJC3Q8NFK1 279 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 OR13C3Q8NGS6 347 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 SLC25A28Q96A46 364 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 CALHM2Q9HA72 323 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 SLC17A5Q9NRA2 495 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 RHBDD3Q9Y3P4 386 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF175Q9Y473 711 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 MYO7BQ6PIF6 2116 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 DOCK7Q96N67 2140 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 ARHGAP21Q5T5U3 1957 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 PTH2RP49190 550 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF84P51523 738 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 CLDN12P56749 244 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 STK11Q15831 433 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 SLC36A2Q495M3 483 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 AGAP6Q5VW22 663 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 Q6ZSR3 168 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 GALNT11Q8NCW6 608 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 C15orf40Q8WUR7 153 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 TAS2R4Q9NYW5 299 aa13.23□□□□□ -0.29
SCAF11-204ENST00000395454 RBMX2Q9Y388 322 aaKnown RBP13.23□□□□□ -0.29
SCAF11-204ENST00000395454 PCNX1Q96RV3 2341 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 A6NIN4 97 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 P2RY10O00398 339 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 HOXD4P09016 255 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-204ENST00000395454 HSD11B1P28845 292 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 SLC6A1P30531 599 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 GUCA1AP43080 201 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-204ENST00000395454 UQCRFS1P47985 274 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 ART1P52961 327 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 PER3P56645 1201 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 MRPS10P82664 201 aaKnown RBP13.22□□□□□ -0.29
SCAF11-204ENST00000395454 EIF2S3LQ2VIR3 472 aaKnown RBP13.22□□□□□ -0.29
SCAF11-204ENST00000395454 C1orf100Q5SVJ3 147 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 MCEMP1Q8IX19 187 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 GCNT2Q8N0V5 402 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 C9orf106Q8NAJ2 232 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 PRR7Q8TB68 274 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF775Q96BV0 537 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-204ENST00000395454 S100A16Q96FQ6 103 aaKnown RBP13.22□□□□□ -0.29
SCAF11-204ENST00000395454 RNF122Q9H9V4 155 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 CLEC4AQ9UMR7 237 aa13.22□□□□□ -0.29
SCAF11-204ENST00000395454 BOLA2-SMG1P6H3BVE0 249 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 EEF1E1O43324 174 aaKnown RBP13.21□□□□□ -0.29
SCAF11-204ENST00000395454 GNLYP22749 145 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 ZNF121P58317 390 aaPredicted RBP13.21□□□□□ -0.29
SCAF11-204ENST00000395454 RNPS1Q15287 305 aaKnown RBP13.21□□□□□ -0.29
SCAF11-204ENST00000395454 NRN1LQ496H8 165 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 GLT8D1Q68CQ7 371 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 AAED1Q7RTV5 226 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 SYNPRQ8TBG9 265 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 ENKURQ8TC29 256 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 WNT2BQ93097 391 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 TMEM38BQ9NVV0 291 aa13.21□□□□□ -0.29
SCAF11-204ENST00000395454 LOC100289279A0A1B0GTE1 492 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 CST2P09228 141 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 DDOSTP39656 456 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 CA7P43166 264 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 CAPZA1P52907 286 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 DGCR2P98153 550 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 RAB11BQ15907 218 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 SGCAQ16586 387 aa13.21□□□□□ -0.3
SCAF11-204ENST00000395454 CCDC92Q53HC0 331 aaPredicted RBP13.21□□□□□ -0.3
SCAF11-204ENST00000395454 ANKRD16Q6P6B7 361 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms