RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 GTF3C1Q12789 2109 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 A0A1B0GVI7 797 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 ZNF587BE7ETH6 402 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 PTTG1O95997 202 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 IGLV3-1P01715 115 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 HLA-HP01893 362 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 EFNB2P52799 333 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 LYPD6Q86Y78 171 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 THRSPQ92748 146 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 ABHD17AQ96GS6 310 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 PGAM5Q96HS1 289 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 TRIB1Q96RU8 372 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 CKLFQ9UBR5 152 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 STEAP1Q9UHE8 339 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 RHBDD3Q9Y3P4 386 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 ZNF175Q9Y473 711 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 TIMM10BQ9Y5J6 103 aa16.09■□□□□ 0.17
USP39-201ENST00000323701 CCL1P22362 96 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 GNALP38405 381 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 RFX2P48378 723 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 PITPNBP48739 271 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 KRTAP27-1Q3LI81 207 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 UBE2NLQ5JXB2 153 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 SLC25A28Q96A46 364 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 WACQ9BTA9 647 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 HDHD2Q9H0R4 259 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 UPB1Q9UBR1 384 aa16.08■□□□□ 0.16
USP39-201ENST00000323701 MRPS7Q9Y2R9 242 aaKnown RBP16.08■□□□□ 0.16
USP39-201ENST00000323701 TLN1Q9Y490 2541 aaKnown RBP16.08■□□□□ 0.16
USP39-201ENST00000323701 PLA2G10O15496 165 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 GSTT2P0CG29 244 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 GSTT2BP0CG30 244 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 HTR5AP47898 357 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 TPTEP56180 551 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 SCRN3Q0VDG4 424 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 PABPC1L2AQ5JQF8 200 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 GLYATL3Q5SZD4 288 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 MTFR2Q6P444 385 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 OR2AE1Q8NHA4 323 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 GCDHQ92947 438 aaPredicted RBP16.07■□□□□ 0.16
USP39-201ENST00000323701 IL18BPO95998 194 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 CD37P11049 281 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 TALDO1P37837 337 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 DDOSTP39656 456 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 ZNF529Q6P280 563 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 CCBE1Q6UXH8 406 aaPredicted RBP16.07■□□□□ 0.16
USP39-201ENST00000323701 CELF2-AS1Q8N7Q2 184 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 OR52N4Q8NGI2 321 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 OR13C9Q8NGT0 318 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 SYNPRQ8TBG9 265 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 EXTL1Q92935 676 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 NEDD4LQ96PU5 975 aa16.07■□□□□ 0.16
USP39-201ENST00000323701 SLC17A2O00624 439 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 CALCBP10092 127 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 PTHLHP12272 177 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 CFPP27918 469 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 NRARPQ7Z6K4 114 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 C9orf106Q8NAJ2 232 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 OR14K1Q8NGZ2 314 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 SPTSSAQ969W0 71 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 ZFP3Q96NJ6 502 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 SPACA5Q96QH8 159 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 PTBP1P26599 531 aaKnown RBP eCLIP16.06■□□□□ 0.16
USP39-201ENST00000323701 POU3F4P49335 361 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 RNASE12Q5GAN4 147 aaKnown RBP16.06■□□□□ 0.16
USP39-201ENST00000323701 ZNF627Q7L945 461 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 P4HA3Q7Z4N8 544 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 OR4D6Q8NGJ1 314 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 SGK3Q96BR1 496 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 GMPPAQ96IJ6 420 aaPredicted RBP16.06■□□□□ 0.16
USP39-201ENST00000323701 C11orf54Q9H0W9 315 aaPredicted RBP16.06■□□□□ 0.16
USP39-201ENST00000323701 MYEF2Q9P2K5 600 aaKnown RBP16.06■□□□□ 0.16
USP39-201ENST00000323701 DKK4Q9UBT3 224 aa16.06■□□□□ 0.16
USP39-201ENST00000323701 MYO7BQ6PIF6 2116 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 LOC100509620A0A075B734 347 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 ARPC4-TTLL3A0A0A6YYG9 625 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 TTLL8A6PVC2 850 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 SS18L1O75177 396 aaPredicted RBP16.05■□□□□ 0.16
USP39-201ENST00000323701 FARS2O95363 451 aaKnown RBP16.05■□□□□ 0.16
USP39-201ENST00000323701 CCL2P13500 99 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 C2orf76Q3KRA6 126 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 NRN1LQ496H8 165 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 HIKESHIQ53FT3 197 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 OR5AS1Q8N127 324 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 JAGN1Q8N5M9 183 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 OR1M1Q8NGA1 313 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 FAM3DQ96BQ1 224 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 B3GNT2Q9NY97 397 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 TP53TG5Q9Y2B4 290 aa16.05■□□□□ 0.16
USP39-201ENST00000323701 A0A0U1RQV5 110 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 OR6C65A6NJZ3 312 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 K7ENP7 123 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 HLA-DQB1P01920 261 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 FCGR2AP12318 317 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 DGCR2P98153 550 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 SCN1BQ07699 218 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 GUSBP1Q15486 140 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 RAB11BQ15907 218 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 TBR1Q16650 682 aa16.04■□□□□ 0.16
USP39-201ENST00000323701 FBXW9Q5XUX1 488 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms