RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GPR78Q96P69 363 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 GOLGA2P5Q9HBQ8 144 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 HSPB8Q9UJY1 196 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SCGB1D2O95969 90 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SLC2A1P11166 492 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SSTR2P30874 369 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SRP9P49458 86 aaKnown RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 FXYD6P3P58550 94 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 BOD1L2Q8IYS8 172 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SLC38A9Q8NBW4 561 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 OR52L2PQ8NGH6 319 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 OR51A7Q8NH64 312 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 APIPQ96GX9 242 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TAAR6Q96RI8 345 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ARV1Q9H2C2 271 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 GAL3ST2Q9H3Q3 398 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SLC23A2Q9UGH3 650 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 MRPS28Q9Y2Q9 187 aaKnown RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 A0A0A6YYD5 115 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TMEM233B4DJY2 109 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 CSO75390 466 aaKnown RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 CBX7O95931 251 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ACTL6AO96019 429 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 GASTP01350 101 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ACVRL1P37023 503 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 RAC3P60763 192 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ERVK-25P63136 954 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 PRRT3Q5FWE3 981 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 PAPPA-AS1Q5QFB9 102 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ZNF425Q6IV72 752 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 LYPD4Q6UWN0 246 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 OR4S1Q8NGB4 309 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 PTDSS2Q9BVG9 487 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 RBCK1Q9BYM8 510 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 PLXNA4Q9HCM2 1894 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 SLC22A20A6NK97 555 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 A8MUI8 341 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 HLA-DQB1P01920 261 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 GABRB1P18505 474 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 GZMHP20718 246 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 PIN1Q13526 163 aaPredicted RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 COMTD1Q86VU5 262 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TMEM151BQ8IW70 566 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 RIMKLAQ8IXN7 391 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TP53I13Q8NBR0 393 aaPredicted RBP3.65□□□□□ -1.83
USH2A-201ENST00000307340 C11orf40Q8WZ69 217 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 STAG3L3P0CL85 134 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 GNG3P63215 75 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TEAD2Q15562 447 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 OR52E1Q8NGJ3 308 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 OR4K13Q8NH42 304 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 PIPOXQ9P0Z9 390 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 FGF7P21781 194 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 GZMKP49863 264 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TNFSF10P50591 281 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 TXNRD3NBQ6F5E7 133 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 FAM90A1Q86YD7 464 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 ZNF681Q96N22 645 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 NPAS1Q99742 590 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 C1RLQ9NZP8 487 aa3.65□□□□□ -1.83
USH2A-201ENST00000307340 RECKO95980 971 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 F7P08709 466 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR4A8P0C604 315 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SLC25A4P12235 298 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SUMO1P63165 101 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 NHLH1Q02575 133 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF141Q15928 474 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 WBP2Q969T9 261 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SLC22A13Q9Y226 551 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 MRPS18CQ9Y3D5 142 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 SEC14L6B5MCN3 397 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 Q6ZSR9 355 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR52R1Q8NGF1 315 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FBLIM1Q8WUP2 373 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 LOXL4Q96JB6 756 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SDF2Q99470 211 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF331Q9NQX6 463 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 TAAR2Q9P1P5 351 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 KIAA1456Q9P272 454 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 IGHA1P01876 353 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 F11P03951 625 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CD5P06127 495 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 LSSP48449 732 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SLC35G1Q2M3R5 365 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 C18orf21Q32NC0 220 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR4D6Q8NGJ1 314 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 OR6X1Q8NH79 312 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 IFI44Q8TCB0 444 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 MRPL24Q96A35 216 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 ZNF226Q9NYT6 803 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 INTS1Q8N201 2190 aaKnown RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 HIDE1A8MVS5 230 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 CLDN34H7C241 214 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 GALR2O43603 387 aaPredicted RBP3.64□□□□□ -1.83
USH2A-201ENST00000307340 SCO1O75880 301 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SSPNQ14714 243 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 HFEQ30201 348 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 TEX30Q5JUR7 227 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 FCRLBQ6BAA4 426 aa3.64□□□□□ -1.83
USH2A-201ENST00000307340 SMG9Q9H0W8 520 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms