RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ZNF319Q9P2F9 582 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 N6AMT1Q9Y5N5 214 aa16.41■□□□□ 0.22
PDLIM3-202ENST00000284770 NKX2-6A6NCS4 301 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 GATBO75879 557 aaKnown RBP16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 IGLV1-44P01699 117 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 TTRP02766 147 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 ISG15P05161 165 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 CELA3BP08861 270 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 AGAP20933 346 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 CCNOP22674 350 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 PPA1Q15181 289 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 TBC1D28Q2M2D7 210 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 MYPOPQ86VE0 399 aaPredicted RBP16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 OR8B12Q8NGG6 310 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 OR52H1Q8NGJ2 320 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 RNASE6Q93091 150 aaKnown RBP16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 OR14A2Q96R54 314 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 CXorf56Q9H5V9 222 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 KCNJ16Q9NPI9 418 aa16.4■□□□□ 0.22
PDLIM3-202ENST00000284770 TRBV5-5A0A0J9YX44 114 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 UCHL1P09936 223 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 CLEC2LP0C7M8 214 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 UBCP0CG48 685 aaKnown RBP16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 ANOS1P23352 680 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 CALRP27797 417 aaKnown RBP16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 PAMR1Q6UXH9 720 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 SSX8Q7RTT4 187 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 TBC1D15Q8TC07 691 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 SLC25A46Q96AG3 418 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 LRRC46Q96FV0 321 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 PGAM5Q96HS1 289 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 C1QTNF5Q9BXJ0 243 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 BARHL1Q9BZE3 327 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 NXF2Q9GZY0 626 aaKnown RBP16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 SNTG1Q9NSN8 517 aa16.39■□□□□ 0.21
PDLIM3-202ENST00000284770 ZNF879B4DU55 563 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 LCATP04180 440 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 PPP3CBP16298 524 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 MXD1Q05195 221 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 SNAI3Q3KNW1 292 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 C3orf36Q3SXR2 165 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 TMEM244Q5VVB8 128 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 XKRXQ6PP77 449 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 COLCA1Q6ZS62 124 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 C22orf34Q6ZV56 151 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 OR1J2Q8NGS2 313 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 OR10AC1Q8NH08 325 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 PHYHIPQ92561 330 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 SLC24A3Q9HC58 644 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 A0A0U1RQV5 110 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 PIN1P1O15428 100 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 ZG16O60844 167 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 MAGEB1P43366 347 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 MTNR1BP49286 362 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 Q499Y3 187 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 OR51A4Q8NGJ6 313 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 GPR148Q8TDV2 347 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 DERL3Q96Q80 235 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 OR10A2Q9H208 303 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 TPK1Q9H3S4 243 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 A3GALT2U3KPV4 340 aa16.38■□□□□ 0.21
PDLIM3-202ENST00000284770 C5orf63A6NC05 138 aa16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 P2RY10O00398 339 aa16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 TBX1O43435 398 aa16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 CECR9P0C854 216 aa16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 ACHEP22303 614 aa16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 ZNF404Q494X3 552 aa16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 PAQR4Q8N4S7 273 aaPredicted RBP16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 OR51E1Q8TCB6 317 aa16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 ITLN2Q8WWU7 325 aaPredicted RBP16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 HHLA2Q9UM44 414 aa16.37■□□□□ 0.21
PDLIM3-202ENST00000284770 IGHV1-18A0A0C4DH31 117 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 LOC107986453A0A1B0GWG9 222 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 A0A1W2PPK0 400 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 CASKO14936 926 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 ARL6IP5O75915 188 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 IGLV3-1P01715 115 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 SOX6P35712 828 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 RORCP51449 518 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 ALKBH2Q6NS38 261 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 ZNF808Q8N4W9 903 aaPredicted RBP16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 MCFD2Q8NI22 146 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 APOBEC3DQ96AK3 386 aaPredicted RBP16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 CDH20Q9HBT6 801 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 NOX4Q9NPH5 578 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 NPAP1Q9NZP6 1156 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 HIVEP3Q5T1R4 2406 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 TRAV1-2A0A0B4J238 106 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 A0A1B0GTI1 187 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 ICMTO60725 284 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 OCM2P0CE71 109 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 WNT5AP41221 380 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 ZNF83P51522 516 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 SEZ6L2Q6UXD5 910 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 LINC00299Q6ZSB3 139 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 NR2C2APQ86WQ0 139 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 SGK3Q96BR1 496 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 MMP27Q9H306 513 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 GPR84Q9NQS5 396 aa16.36■□□□□ 0.21
PDLIM3-202ENST00000284770 TBCCD1Q9NVR7 557 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms