RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 FCGR2CP31995 323 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 WIPI1Q5MNZ9 446 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-201ENST00000225964 LCN15Q6UWW0 184 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 UBE2FQ969M7 185 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 MYOZ1Q9NP98 299 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-201ENST00000225964 KIF13AQ9H1H9 1805 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 MAVSQ7Z434 540 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 GATA6Q92908 595 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 PTDSS2Q9BVG9 487 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 CYC1P08574 325 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 CCR9P51686 369 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 PNLIPRP2P54317 469 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 SYT14P1Q58G82 188 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 TMPRSS11FQ6ZWK6 438 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 MISP3Q96FF7 219 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 NPAP1Q9NZP6 1156 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 CDC14BO60729 498 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 MPLP40238 635 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 TMEM196Q5HYL7 178 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 DMRTC1Q5HYR2 192 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 SLC25A26Q70HW3 274 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 MVB12AQ96EY5 273 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 DDOQ99489 341 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 GON7Q9BXV9 100 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 ESRP2Q9H6T0 727 aaKnown RBP11.98□□□□□ -0.49
COL1A1-201ENST00000225964 AHDC1Q5TGY3 1603 aaPredicted RBP11.98□□□□□ -0.49
COL1A1-201ENST00000225964 TMEM235A6NFC5 223 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 NTF3P20783 257 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 TPBGQ13641 420 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 PCK2Q16822 640 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 TMEM123Q8N131 208 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 OR13C5Q8NGS8 318 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 OR52I2Q8NH67 350 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 LRRC3CA6NJW4 275 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 METTL12A8MUP2 240 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 PCBP3P57721 371 aaKnown RBP11.98□□□□□ -0.49
COL1A1-201ENST00000225964 HIST2H3AQ71DI3 136 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.98□□□□□ -0.49
COL1A1-201ENST00000225964 OSR2Q8N2R0 312 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 TXNIPQ9H3M7 391 aa11.98□□□□□ -0.49
COL1A1-201ENST00000225964 MT-CO3P00414 261 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 AVPI1Q5T686 147 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 SLC51BQ86UW2 128 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 ARHGEF39Q8N4T4 335 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 HINT3Q9NQE9 182 aaKnown RBP11.97□□□□□ -0.49
COL1A1-201ENST00000225964 FAM53CQ9NYF3 392 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 ACOT8O14734 319 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 TOR2AQ5JU69 321 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 PELI3Q8N2H9 469 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 SLC7A6Q92536 515 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 PELI1Q96FA3 418 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 ALKBH3Q96Q83 286 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-201ENST00000225964 PLSCR3Q9NRY6 295 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 ASIC5Q9NY37 505 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 ST3GAL6Q9Y274 331 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 DNASE2O00115 360 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-201ENST00000225964 TOX4O94842 621 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
COL1A1-201ENST00000225964 TIGITQ495A1 244 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 TMEM65Q6PI78 240 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 MARC2Q969Z3 335 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 LYSMD1Q96S90 227 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 OR6C68A6NDL8 312 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 OR2W5A6NFC9 320 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 PRDX4Q13162 271 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 GSG1Q2KHT4 349 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 CEACAM16Q2WEN9 425 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 POM121L2Q96KW2 1035 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 CMC2Q9NRP2 79 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 A0A087WV62 115 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 CCR2P41597 374 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 RPS27P42677 84 aaKnown RBP11.97□□□□□ -0.49
COL1A1-201ENST00000225964 BAMBIQ13145 260 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 PLPPR2Q96GM1 343 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 LRP3O75074 770 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 GPX2P18283 190 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 TNFRSF1AP19438 455 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 HYAL1Q12794 435 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 UBTD1Q9HAC8 227 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 POMT2Q9UKY4 750 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 HDGFL3Q9Y3E1 203 aa11.97□□□□□ -0.49
COL1A1-201ENST00000225964 PLCH1Q4KWH8 1693 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 OR2C1O95371 312 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 H3F3AP84243 136 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.96□□□□□ -0.49
COL1A1-201ENST00000225964 ACER3Q9NUN7 267 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 TRAV17A0A0B4J275 112 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 ST8SIA5O15466 376 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 GABRG2P18507 467 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 DEFA6Q01524 100 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 HFEQ30201 348 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 SLC24A4Q8NFF2 622 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 PRR7Q8TB68 274 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 ISL2Q96A47 359 aa11.96□□□□□ -0.49
COL1A1-201ENST00000225964 MYO18AQ92614 2054 aaKnown RBP11.96□□□□□ -0.49
COL1A1-201ENST00000225964 NRAPQ86VF7 1730 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms