RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ZNF391Q9UJN7 358 aa2.19□□□□□ -2.06
SCAMP1-205ENST00000614488 STARD10Q9Y365 291 aa2.19□□□□□ -2.06
SCAMP1-205ENST00000614488 COMMD3-BMI1R4GMX3 469 aa2.19□□□□□ -2.06
SCAMP1-205ENST00000614488 SCN4AP35499 1836 aa2.19□□□□□ -2.06
SCAMP1-205ENST00000614488 NLRC5Q86WI3 1866 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 IGHV7-4-1A0A0J9YVY3 117 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 A0A1B0GTQ1 180 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TMEM120BA0PK00 339 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 C5orf63A6NC05 138 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 SUPT3HB4E1H0 165 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 NUPL2O15504 423 aaKnown RBP2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 SEMA3DO95025 777 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 OTCP00480 354 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 CSTAP01040 98 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 SLC2A3P11169 496 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TUBG1P23258 451 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TGFBR1P36897 503 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TNFSF9P41273 254 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 CDKN2DP55273 166 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 PPP1CBP62140 327 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TRDNQ13061 729 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 RCAN2Q14206 197 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 KRTAP6-3Q3LI67 103 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 PIP5KL1Q5T9C9 394 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 PRAMEF5Q5TYX0 476 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 FAM222AQ5U5X8 452 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 PRAMEF6Q5VXH4 476 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 CARD17Q5XLA6 110 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 CASP12Q6UXS9 341 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 CERS6Q6ZMG9 384 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TMEM150AQ86TG1 271 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 COX18Q8N8Q8 333 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 ZFP41Q8N8Y5 198 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 C1orf64Q8NEQ6 169 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TTLQ8NG68 377 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 OR8K3Q8NH51 312 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 SUN5Q8TC36 379 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 KLF14Q8TD94 323 aaPredicted RBP2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 SLC2A14Q8TDB8 520 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 ISG20Q96AZ6 181 aaKnown RBP2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 ZNF707Q96C28 371 aaPredicted RBP2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 LRRC39Q96DD0 335 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TVP23CQ96ET8 276 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 DUS3LQ96G46 650 aaKnown RBP2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 ATP5SQ99766 215 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 MICU1Q9BPX6 476 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 ILKAPQ9H0C8 392 aaPredicted RBP2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 CYP3A43Q9HB55 503 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 TUBG2Q9NRH3 451 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 UBAP1Q9NZ09 502 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 PISDQ9UG56 409 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 NOSIPQ9Y314 301 aaKnown RBP2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 PALLDQ8WX93 1383 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 PLEKHG2Q9H7P9 1386 aa2.18□□□□□ -2.06
SCAMP1-205ENST00000614488 HEATR9A2RTY3 570 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 BTNL10A8MVZ5 291 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 POLR1CO15160 346 aaPredicted RBP2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 CETN3O15182 167 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 CDH16O75309 829 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 E2F6O75461 281 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 WBP4O75554 376 aaKnown RBP2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 IGLV3-25P01717 112 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 ERGP11308 486 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 CPN2P22792 545 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 CHMLP26374 656 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 GDI2P50395 445 aaKnown RBP2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 CDH6P55285 790 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 IL18Q14116 193 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 ZNF726P1Q15940 193 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 SSX2Q16385 188 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 ALKBH6Q3KRA9 238 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 HIKESHIQ53FT3 197 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 UBE2UQ5VVX9 321 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 H3F3CQ6NXT2 135 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 KATNAL2Q8IYT4 538 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 TCAIMQ8N3R3 496 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 OR10AD1Q8NGE0 317 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 C19orf60Q96EN9 201 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 DNAJC1Q96KC8 554 aaKnown RBP2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 IP6K3Q96PC2 410 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 ANKRA2Q9H9E1 313 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 NEK6Q9HC98 313 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 PDP1Q9P0J1 537 aaPredicted RBP2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 GCNT4Q9P109 453 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 PSMC3IPQ9P2W1 217 aaPredicted RBP2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 LTBP4Q8N2S1 1624 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 AKNAQ7Z591 1439 aa2.17□□□□□ -2.06
SCAMP1-205ENST00000614488 TEX46H3BTG2 121 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 NDUFS8O00217 210 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 LSM1O15116 133 aaKnown RBP2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 FGFR1OPO95684 399 aaKnown RBP2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 CST1P01037 141 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 IGHV3-11P01762 117 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 KRT14P02533 472 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 SERPINA5P05154 406 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 CCDC172P0C7W6 258 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 LOXP28300 417 aaPredicted RBP2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 RPS5P46782 204 aaKnown RBP2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 CLDN8P56748 225 aa2.16□□□□□ -2.06
SCAMP1-205ENST00000614488 RPS15P62841 145 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms