RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ZNF582Q96NG8 517 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-208ENST00000558827 DIRC2Q96SL1 478 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 FAM53CQ9NYF3 392 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 PDP1Q9P0J1 537 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-208ENST00000558827 METRNQ9UJH8 293 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 PCDHB10Q9UN67 800 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 PPP1R3CQ9UQK1 317 aa10.56□□□□□ -0.72
SMAD3-208ENST00000558827 M0R135 149 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 E2F6O75461 281 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 IGHV2-70P01814 119 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 SPI1P17947 270 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 FMO3P31513 532 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 TPTEP56180 551 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 SEC61A1P61619 476 aaKnown RBP10.55□□□□□ -0.72
SMAD3-208ENST00000558827 SLC3A1Q07837 685 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 GK2Q14410 553 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-208ENST00000558827 ZMYND11Q15326 602 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 SNAI3Q3KNW1 292 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 KRTAP27-1Q3LI81 207 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 FBXW12Q6X9E4 464 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 BOLLQ8N9W6 283 aaKnown RBP10.55□□□□□ -0.72
SMAD3-208ENST00000558827 OR2T33Q8NG76 320 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 OR13G1Q8NGZ3 307 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 SLC7A6OSQ96CW6 309 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-208ENST00000558827 ZNF799Q96GE5 643 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 MEGF10Q96KG7 1140 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 COG8Q96MW5 612 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 COPS4Q9BT78 406 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 C19orf24Q9BVV8 132 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
SMAD3-208ENST00000558827 RBM4Q9BWF3 364 aaKnown RBP10.55□□□□□ -0.72
SMAD3-208ENST00000558827 C1QTNF5Q9BXJ0 243 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 DGCR6LQ9BY27 220 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 OR51V1Q9H2C8 321 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 G6PC2Q9NQR9 355 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 UFSP2Q9NUQ7 469 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 TMEM100Q9NV29 134 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 CGGBP1Q9UFW8 167 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-208ENST00000558827 COMMD3-BMI1R4GMX3 469 aa10.55□□□□□ -0.72
SMAD3-208ENST00000558827 TRAV20A0A0B4J274 112 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 RIIAD1A6NNX1 92 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 ANPEPP15144 967 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 TUBG1P23258 451 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 PMELP40967 661 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 ENTPD1P49961 510 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 MMP16P51512 607 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 CBX1P83916 185 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 ZNF92Q03936 586 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 ECH1Q13011 328 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 MALLQ13021 153 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 GINS1Q14691 196 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 DCAF12L2Q5VW00 463 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 PRAMEF6Q5VXH4 476 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 TMEM236Q5W0B7 351 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 COLCA1Q6ZS62 124 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 MRPL21Q7Z2W9 205 aaKnown RBP10.54□□□□□ -0.72
SMAD3-208ENST00000558827 ERI1Q8IV48 349 aaKnown RBP10.54□□□□□ -0.72
SMAD3-208ENST00000558827 OR6N2Q8NGY6 317 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 TEX47Q8TBZ9 253 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 ST7LQ8TDW4 575 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 SPRYD4Q8WW59 207 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-208ENST00000558827 C22orf15Q8WYQ4 148 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 SPTSSAQ969W0 71 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 SLAMF6Q96DU3 332 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 ZMYND19Q96E35 227 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-208ENST00000558827 SIGLEC11Q96RL6 698 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 TMPRSS13Q9BYE2 586 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 C1orf21Q9H246 121 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 BRD7Q9NPI1 651 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 MMP26Q9NRE1 261 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 TUBG2Q9NRH3 451 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 DNAJC27Q9NZQ0 273 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 IL19Q9UHD0 177 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 ATPIF1Q9UII2 106 aa10.54□□□□□ -0.72
SMAD3-208ENST00000558827 GGT3PA6NGU5 568 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 AQP12BA6NM10 295 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 IQCF6A8MYZ5 107 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 TMEM178BH3BS89 294 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 SURF4O15260 269 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 TBX1O43435 398 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 FKBP6O75344 327 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 VENTXO95231 258 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 PNPP00491 289 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 IFNGP01579 166 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 PCMT1P22061 227 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 CA6P23280 308 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 BTG1P62324 171 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 EIF2B1Q14232 305 aaKnown RBP10.53□□□□□ -0.72
SMAD3-208ENST00000558827 FLOT2Q14254 428 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 GLYATL3Q5SZD4 288 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 LINC01590Q5TEZ4 76 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 PLBD1Q6P4A8 553 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 PGAP1Q75T13 922 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 AQP12AQ8IXF9 295 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 DEFB108BQ8NET1 73 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 AMELYQ99218 206 aa10.53□□□□□ -0.72
SMAD3-208ENST00000558827 SLC30A2Q9BRI3 323 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms