RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 NPIPA1Q9UND3 350 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 CHCHD2Q9Y6H1 151 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 ROS1P08922 2347 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 hCG_1809904A0A1W2PP81 198 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 A0A1W2PR64 198 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 A0A1W2PRV1 198 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 F5H5P2 479 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 H7C1C5 153 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 OR2T1O43869 369 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 SLC19A2O60779 497 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 FBXO24O75426 580 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 AHSA1O95433 338 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 GABRA5P31644 462 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 MEOX1P50221 254 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 LCN6P62502 163 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 LINC00303Q3SY05 128 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 PLA1AQ53H76 456 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 ZNF766Q5HY98 468 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 TMEM69Q5SWH9 247 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 SLC27A4Q6P1M0 643 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 BTN2A1Q7KYR7 527 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 LRRC28Q86X40 367 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 SULF2Q8IWU5 870 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 DNAAF1Q8NEP3 725 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 TMED6Q8WW62 240 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 SCMH1Q96GD3 660 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 TNFRSF13CQ96RJ3 184 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 PDCD1LG2Q9BQ51 273 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 PRRG4Q9BZD6 226 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 GABARAPL1Q9H0R8 117 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 ANKRD19PQ9H560 264 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 ZNF552Q9H707 407 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 MED17Q9NVC6 651 aa7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 PURGQ9UJV8 347 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-209ENST00000509277 OR5H15A6NDH6 313 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 MAKP20794 623 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 S100A2P29034 98 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 IFNGR2P38484 337 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ZNF124Q15973 351 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 PCGF3Q3KNV8 242 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 TMEM255AQ5JRV8 349 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 DCAF12L2Q5VW00 463 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 PRAMEF8Q5VWM4 474 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 PRAMEF7Q5VXH5 474 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 OR10H5Q8NGA6 315 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 OR6K6Q8NGW6 343 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 STOML3Q8TAV4 291 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ADAMTS17Q8TE56 1095 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 TMEM234Q8WY98 164 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 PMM1Q92871 262 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 SIGLEC11Q96RL6 698 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 VRK1Q99986 396 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ATG101Q9BSB4 218 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 FKRPQ9H9S5 495 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 POLE3Q9NRF9 147 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 UFSP2Q9NUQ7 469 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 MKRN2OSH3BPM6 223 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 FAAHO00519 579 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 CDC42EP2O14613 210 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 YIF1AO95070 293 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 PPP1R3DO95685 299 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 PPP3CBP16298 524 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 BDKRB2P30411 391 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 SOX8P57073 446 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 PPIAP62937 165 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 HSF1Q00613 529 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ACSM3Q53FZ2 586 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 OR2B11Q5JQS5 317 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 NHLRC3Q5JS37 347 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 FAM98AQ8NCA5 519 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 OR52L1Q8NGH7 329 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 OR5M9Q8NGP3 310 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 OR1S1Q8NH92 325 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 RGP1Q92546 391 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ABHD17AQ96GS6 310 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 MOGAT1Q96PD6 335 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ALG8Q9BVK2 526 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 KRCC1Q9NPI7 259 aaPredicted RBP7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 MAN2C1Q9NTJ4 1040 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 KIF25Q9UIL4 384 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 TINAGQ9UJW2 476 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 GTF3C1Q12789 2109 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 MCIDASD6RGH6 385 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 RNF13O43567 381 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 DOK2O60496 412 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ONECUT2O95948 504 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ARG1P05089 322 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 NGFRP08138 427 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 GTF2F2P13984 249 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 RAB6AP20340 208 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 RPS10P46783 165 aaKnown RBP7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 PCP4P48539 62 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ART1P52961 327 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 NDUFA6P56556 154 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 FXYD6P3P58550 94 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 C4orf17Q53FE4 359 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 FAM76BQ5HYJ3 339 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 RHOUQ7L0Q8 258 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 NR2C2APQ86WQ0 139 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ZADH2Q8N4Q0 377 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms