RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TMEM89A2RUT3 159 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 A8MXK9 166 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 DCTN3O75935 186 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 FSHBP01225 129 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 LCATP04180 440 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 RPS2P15880 293 aaKnown RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF12P17014 697 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 GGT2P36268 569 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 RPS27P42677 84 aaKnown RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 COMPP49747 757 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF362Q5T0B9 420 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 SLC35F1Q5T1Q4 408 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF770Q6IQ21 691 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 LRRN1Q6UXK5 716 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 CYP2R1Q6VVX0 501 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 PGAP1Q75T13 922 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 MRPL21Q7Z2W9 205 aaKnown RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 ZBTB46Q86UZ6 589 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 ZDHHC21Q8IVQ6 265 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 OR52E2Q8NGJ4 325 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 OR4C15Q8NGM1 316 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 OR11L1Q8NGX0 322 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 OR2T4Q8NH00 348 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 SPRYD4Q8WW59 207 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 C22orf15Q8WYQ4 148 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 ERGIC1Q969X5 290 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 SLC30A2Q9BRI3 323 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 SSBP3Q9BWW4 388 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 C1QTNF5Q9BXJ0 243 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 MS4A7Q9GZW8 240 aaPredicted RBP11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 SLC22A4Q9H015 551 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 MMP26Q9NRE1 261 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 ARL2BPQ9Y2Y0 163 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 PPIAL4AQ9Y536 164 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 LYVE1Q9Y5Y7 322 aa11.25□□□□□ -0.61
CTDSP1-212ENST00000494067 CEACAM18A8MTB9 384 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 TRAPPC2LH3BP13 241 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 BHLHE40O14503 412 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF205O95201 554 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 CYB5R3P00387 301 aaPredicted RBP11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 WNT2P09544 360 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 PMELP40967 661 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 TRAP1Q12931 704 aaKnown RBP11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF181Q2M3W8 571 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 CLEC12AQ5QGZ9 265 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 MOGAT3Q86VF5 341 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 FITM2Q8N6M3 262 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 CELF2-AS1Q8N7Q2 184 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 CYB561A3Q8NBI2 242 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 DEFB108BQ8NET1 73 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 PROKR2Q8NFJ6 384 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 OR8B3Q8NGG8 313 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF420Q8TAQ5 688 aaPredicted RBP11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 NEIL1Q96FI4 390 aaPredicted RBP11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 MAP6Q96JE9 813 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 OR8B2Q96RD0 313 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 ZMAT3Q9HA38 289 aaKnown RBP11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 ESM1Q9NQ30 184 aa11.24□□□□□ -0.61
CTDSP1-212ENST00000494067 F5H0A9 414 aaPredicted RBP11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 F5H5P2 479 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 TNFRSF11BO00300 401 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 FSTL3O95633 263 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 ACSM4P0C7M7 580 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 PYCR1P32322 319 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 MTNR1AP48039 350 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 UBA52P62987 128 aaKnown RBP11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 MS4A2Q01362 244 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 FOXL1Q12952 345 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 TAF13Q15543 124 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 KCNJ8Q15842 424 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 FAM201AQ5SY85 155 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 KLBQ86Z14 1044 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 SGMS2Q8NHU3 365 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 SLCO4A1Q96BD0 722 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 CYB5R1Q9UHQ9 305 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 CDH10Q9Y6N8 788 aa11.23□□□□□ -0.61
CTDSP1-212ENST00000494067 A0A1B0GWJ7 208 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 GGT3PA6NGU5 568 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 TVP23AA6NH52 213 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 M0R135 149 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 CCNB2O95067 398 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 GASTP01350 101 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 HLA-DPB1P04440 258 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 T-ENOLP0DO92 83 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 MAGEA2P43356 314 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 HMGA2P52926 109 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 MZT1Q08AG7 82 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 BAMBIQ13145 260 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 GK2Q14410 553 aaPredicted RBP11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 OR8G1Q15617 311 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 KLF17Q5JT82 389 aaPredicted RBP11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 SIGLECL1Q8N7X8 197 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 ZDHHC22Q8N966 263 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 OR51L1Q8NGJ5 315 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 OR4Q3Q8NH05 313 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 RAB40AQ8WXH6 277 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 DVL3Q92997 716 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms