RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 POLR3KQ9Y2Y1 108 aaPredicted RBP12.15□□□□□ -0.46
CLDN11-207ENST00000486975 SAMHD1Q9Y3Z3 626 aaKnown RBP12.15□□□□□ -0.46
CLDN11-207ENST00000486975 ISPDA4D126 451 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 FSTL3O95633 263 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 RAP2AP10114 183 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 ZNF823P16415 610 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
CLDN11-207ENST00000486975 BTG1P62324 171 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 DBPQ10586 325 aaPredicted RBP12.14□□□□□ -0.47
CLDN11-207ENST00000486975 TRAP1Q12931 704 aaKnown RBP12.14□□□□□ -0.47
CLDN11-207ENST00000486975 PCK2Q16822 640 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 ZNF181Q2M3W8 571 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 CD300LDQ6UXZ3 194 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 C1orf229Q6ZS94 237 aaPredicted RBP12.14□□□□□ -0.47
CLDN11-207ENST00000486975 C1QL2Q7Z5L3 287 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 LRRC28Q86X40 367 aaPredicted RBP12.14□□□□□ -0.47
CLDN11-207ENST00000486975 OR5AS1Q8N127 324 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 CYB561A3Q8NBI2 242 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 SLC37A3Q8NCC5 494 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 PROKR2Q8NFJ6 384 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 ST7LQ8TDW4 575 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 MAP6Q96JE9 813 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 MEGF10Q96KG7 1140 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 RBM4Q9BWF3 364 aaKnown RBP12.14□□□□□ -0.47
CLDN11-207ENST00000486975 HCAR1Q9BXC0 346 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 NMNAT2Q9BZQ4 307 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 PATZ1Q9HBE1 687 aaKnown RBP12.14□□□□□ -0.47
CLDN11-207ENST00000486975 GCM1Q9NP62 436 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 TAS2R1Q9NYW7 299 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 COMMD3-BMI1R4GMX3 469 aa12.14□□□□□ -0.47
CLDN11-207ENST00000486975 ARRDC5A6NEK1 342 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 A8MXK9 166 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-207ENST00000486975 F5H5K5 113 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 M0R135 149 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 ACOT8O14734 319 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 FOXH1O75593 365 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 SBK2P0C263 348 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 PYCR1P32322 319 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
CLDN11-207ENST00000486975 SRP9P49458 86 aaKnown RBP12.13□□□□□ -0.47
CLDN11-207ENST00000486975 SLC25A1P53007 311 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 TPTEP56180 551 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 MALLQ13021 153 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 GK2Q14410 553 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-207ENST00000486975 ZMYND11Q15326 602 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 TEX30Q5JUR7 227 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 DCAF12L2Q5VW00 463 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 MUC20Q8N307 709 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-207ENST00000486975 KLHL36Q8N4N3 616 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 CELF2-AS1Q8N7Q2 184 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 ATG16L2Q8NAA4 619 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 OR2T33Q8NG76 320 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 OR10S1Q8NGN2 331 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 SPTSSAQ969W0 71 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 ZNF799Q96GE5 643 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 TSSK6Q9BXA6 273 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 UBAP1Q9NZ09 502 aa12.13□□□□□ -0.47
CLDN11-207ENST00000486975 MLNRO43193 412 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 FSHBP01225 129 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 LCATP04180 440 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 GATA4P43694 442 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 BLVRAP53004 296 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 SRSF2Q01130 221 aaKnown RBP12.12□□□□□ -0.47
CLDN11-207ENST00000486975 PPP1R8Q12972 351 aaKnown RBP12.12□□□□□ -0.47
CLDN11-207ENST00000486975 CRMP1Q14194 572 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 USP43Q70EL4 1123 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 SEMA6DQ8NFY4 1073 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 OR10AD1Q8NGE0 317 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 OR4Q3Q8NH05 313 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 ZNRF4Q8WWF5 429 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 LRGUKQ96M69 825 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 PCDHB10Q9UN67 800 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 U3KQV3 271 aa12.12□□□□□ -0.47
CLDN11-207ENST00000486975 DYSFO75923 2080 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 AQP12BA6NM10 295 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 SOX14O95416 240 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 IFNGP01579 166 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 SPI1P17947 270 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 EPHA1P21709 976 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 FMO3P31513 532 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 SLC6A9P48067 706 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 ENTPD1P49961 510 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 LCN2P80188 198 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 DRAM2Q6UX65 266 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 AQP12AQ8IXF9 295 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 BHLHE23Q8NDY6 225 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 OR10G2Q8NGC3 310 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 OR9Q1Q8NGQ5 310 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 ZNF418Q8TF45 676 aaPredicted RBP12.11□□□□□ -0.47
CLDN11-207ENST00000486975 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 CCDC124Q96CT7 223 aaKnown RBP12.11□□□□□ -0.47
CLDN11-207ENST00000486975 CHID1Q9BWS9 393 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 SLC22A4Q9H015 551 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 WDR76Q9H967 626 aa12.11□□□□□ -0.47
CLDN11-207ENST00000486975 CMC2Q9NRP2 79 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms