RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GPR6P46095 362 aaPredicted RBP10.97□□□□□ -0.65
COL5A1-206ENST00000465877 PRSS12P56730 875 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 APOFQ13790 326 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 TRIP10Q15642 601 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 SNAI3Q3KNW1 292 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 C6orf52Q5T4I8 152 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 LCN1P1Q5VSP4 162 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 SLX4IPQ5VYV7 408 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 DRAM2Q6UX65 266 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 USP51Q70EK9 711 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 SPATC1Q76KD6 591 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 DIRC2Q96SL1 478 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 AMELYQ99218 206 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 KCNJ15Q99712 375 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 GABARAPL3Q9BY60 117 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 ZDHHC8Q9ULC8 765 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 CCDC182A6NF36 153 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 IQCF6A8MYZ5 107 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 INAFM1C9JVW0 142 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 CD55P08174 381 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 TACSTD2P09758 323 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 COL8A2P25067 703 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 HSD11B1P28845 292 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 CHN2P52757 468 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 GRB2P62993 217 aaKnown RBP10.96□□□□□ -0.65
COL5A1-206ENST00000465877 MALLQ13021 153 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 CDK5R2Q13319 367 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 GK2Q14410 553 aaPredicted RBP10.96□□□□□ -0.65
COL5A1-206ENST00000465877 TAF13Q15543 124 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 C12orf73Q69YU5 71 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 OR2T2Q6IF00 324 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 Q6ZR03 302 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 SHFQ7M4L6 423 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 NAA40Q86UY6 237 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 OR5AS1Q8N127 324 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 BHLHE23Q8NDY6 225 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 OTOSQ8NHW6 89 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 RNF133Q8WVZ7 376 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 HAVCR1Q96D42 359 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 ELMOD3Q96FG2 381 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 RBM4BQ9BQ04 359 aaKnown RBP10.96□□□□□ -0.65
COL5A1-206ENST00000465877 ABHD6Q9BV23 337 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 OSBPL10Q9BXB5 764 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 EGLN1Q9GZT9 426 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 RIBC2Q9H4K1 309 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 CENPMQ9NSP4 180 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 CACNG2Q9Y698 323 aa10.96□□□□□ -0.65
COL5A1-206ENST00000465877 LRP5LA4QPB2 252 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 CLDN25C9JDP6 229 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 EI24O14681 340 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 TLX2O43763 284 aaPredicted RBP10.95□□□□□ -0.66
COL5A1-206ENST00000465877 LILRA1O75019 489 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 ALPLP05186 524 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 LYNP07948 512 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 MRPL3P09001 348 aaKnown RBP10.95□□□□□ -0.66
COL5A1-206ENST00000465877 IGHV4-31P0DP07 118 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 SLC2A1P11166 492 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 IL2RGP31785 369 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 OPRL1P41146 370 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 CRYBB2P43320 205 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 CX3CR1P49238 355 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 PRKXP51817 358 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 TNFAIP6P98066 277 aaPredicted RBP10.95□□□□□ -0.66
COL5A1-206ENST00000465877 SPRNQ5BIV9 151 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 MRPL21Q7Z2W9 205 aaKnown RBP10.95□□□□□ -0.66
COL5A1-206ENST00000465877 ZNF283Q8N7M2 679 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 OR2Z1Q8NG97 314 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 OR10AD1Q8NGE0 317 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 OR2AE1Q8NHA4 323 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 TMEM163Q8TC26 289 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 TOR3AQ9H497 397 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 KLHDC2Q9Y2U9 406 aa10.95□□□□□ -0.66
COL5A1-206ENST00000465877 C5orf63A6NC05 138 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 MLNRO43193 412 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 PPIHO43447 177 aaKnown RBP10.94□□□□□ -0.66
COL5A1-206ENST00000465877 ANXA2P07355 339 aaKnown RBP10.94□□□□□ -0.66
COL5A1-206ENST00000465877 SELEP16581 610 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 TNFSF4P23510 183 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 SLC15A1P46059 708 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 GZMKP49863 264 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 HFEQ30201 348 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 GLYATL3Q5SZD4 288 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 NXNL2Q5VZ03 156 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 PGAP1Q75T13 922 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 RHOUQ7L0Q8 258 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 BCDIN3DQ7Z5W3 292 aaKnown RBP10.94□□□□□ -0.66
COL5A1-206ENST00000465877 TCEANCQ8N8B7 351 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 OR8G5Q8NG78 346 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 ZNF582Q96NG8 517 aaPredicted RBP10.94□□□□□ -0.66
COL5A1-206ENST00000465877 OR2V2Q96R30 315 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 CNN2Q99439 309 aaKnown RBP10.94□□□□□ -0.66
COL5A1-206ENST00000465877 NARFLQ9H6Q4 476 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 S100A14Q9HCY8 104 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 USE1Q9NZ43 259 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 DNAJC27Q9NZQ0 273 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 ORC6Q9Y5N6 252 aa10.94□□□□□ -0.66
COL5A1-206ENST00000465877 SLC22A31A6NKX4 558 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 XRCC2O43543 280 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 H2BFMP0C1H6 154 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms