RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 AWAT1Q58HT5 328 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 MESTQ5EB52 335 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 FAM201AQ5SY85 155 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 CORO6Q6QEF8 472 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 FOXL2NBQ6ZUU3 175 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 MBOAT2Q6ZWT7 520 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 RRM2BQ7LG56 351 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 HDDC2Q7Z4H3 204 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 C1QL2Q7Z5L3 287 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 NAA40Q86UY6 237 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 BPIFB2Q8N4F0 458 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 SIGLECL1Q8N7X8 197 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 ATG16L2Q8NAA4 619 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 PCYOX1LQ8NBM8 494 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 OR4M2Q8NGB6 313 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 ZNF420Q8TAQ5 688 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 ST7LQ8TDW4 575 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 FAM216AQ8WUB2 273 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 ITLN1Q8WWA0 313 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 LZICQ8WZA0 190 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 TFAP2CQ92754 450 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 DVL3Q92997 716 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 RASD2Q96D21 266 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 TSSK2Q96PF2 358 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 SIKE1Q9BRV8 207 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 POLR2J2Q9GZM3 115 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 EGLN1Q9GZT9 426 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 POLR2J3Q9H1A7 115 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 SYT4Q9H2B2 425 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 WDR76Q9H967 626 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 VIPAS39Q9H9C1 493 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 NMNAT1Q9HAN9 279 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 SMURF2Q9HAU4 748 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 ELOVL3Q9HB03 270 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 POLE4Q9NR33 117 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 TMEM106BQ9NUM4 274 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 GID8Q9NWU2 228 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 PLEK2Q9NYT0 353 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 PTTG3PQ9NZH4 202 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 STX18Q9P2W9 335 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 GRHPRQ9UBQ7 328 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 ZNF69Q9UC07 566 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 PURGQ9UJV8 347 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 ZDHHC8Q9ULC8 765 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 PCDHGB1Q9Y5G3 927 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 IER3IP1Q9Y5U9 82 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 NPTNQ9Y639 398 aa3.94□□□□□ -1.78
GTF3C3-208ENST00000455546 TEX13CA0A0J9YWL9 993 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 TRBV4-1A0A0J9YWV2 114 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 PRSS37A4D1T9 235 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 A6NIZ1 184 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 NPIPB13A6NJU9 1138 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 BBIP1A8MTZ0 92 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 C12orf71A8MTZ7 269 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 B5MCH6 92 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 NPIPB4C9JG80 1138 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 J3QLI3 93 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 DCTN6O00399 190 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 XKRYO14609 159 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 KCNAB3O43448 404 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 SGCEO43556 437 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 DOK2O60496 412 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 KHDRBS3O75525 346 aaKnown RBP3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 FOXH1O75593 365 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 CYB5R3P00387 301 aaPredicted RBP3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 HLA-DPB1P04440 258 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 IFNW1P05000 195 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 CD55P08174 381 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 ADH4P08319 380 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 CD14P08571 375 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 COX4I1P13073 169 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 IFNA8P32881 189 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 CD80P33681 288 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 LIPAP38571 399 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 RPS19P39019 145 aaKnown RBP3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 PMELP40967 661 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 CDKN2AP42771 156 aaKnown RBP3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 COMPP49747 757 aaPredicted RBP3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 GSK3BP49841 420 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 SLC7A2P52569 658 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 PTTG1IPP53801 180 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 FXYD6P3P58550 94 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 RAP1BP61224 184 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 RAP1AP62834 184 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 UBA52P62987 128 aaKnown RBP3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 SLC3A1Q07837 685 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 ZMYND11Q15326 602 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 SEC23BQ15437 767 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 MAPRE2Q15555 327 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 RSPO1Q2MKA7 263 aaPredicted RBP3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 IFI44LQ53G44 452 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 COQ5Q5HYK3 327 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 KLF17Q5JT82 389 aaPredicted RBP3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 OR2T2Q6IF00 324 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 UNQ6126/PRO20091Q6UXV3 157 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 PTCHD4Q6ZW05 846 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 TMPRSS11FQ6ZWK6 438 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 USP43Q70EL4 1123 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 FAM122BQ7Z309 247 aa3.93□□□□□ -1.78
GTF3C3-208ENST00000455546 LRRC28Q86X40 367 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms