RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CCNA2P20248 432 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 STX2P32856 288 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 GABRA3P34903 492 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 PMELP40967 661 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 GSSP48637 474 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 RBBP4Q09028 425 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 RAB32Q13637 225 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 SELPLGQ14242 412 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 FRG1Q14331 258 aaKnown RBP3.81□□□□□ -1.8
SDCBP-205ENST00000447267 TGFBIQ15582 683 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 GSG1Q2KHT4 349 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 SYT14P1Q58G82 188 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 KRBOX4Q5JUW0 171 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 THEM4Q5T1C6 240 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 COLCA1Q6ZS62 124 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 CPLX4Q7Z7G2 160 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF329Q86UD4 541 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 STX12Q86Y82 276 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 SLC22A9Q8IVM8 553 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 ARHGAP24Q8N264 748 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 OR6S1Q8NH40 331 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF519Q8TB69 540 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 IQCDQ96DY2 449 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 ZHX1-C8orf76Q96EF9 292 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 HHATLQ9HCP6 504 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 Q9N2J8 555 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 POLE3Q9NRF9 147 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 SERINC1Q9NRX5 453 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 TAS2R9Q9NYW1 312 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 ONECUT1Q9UBC0 465 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 MGAT4CQ9UBM8 478 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 GIMAP2Q9UG22 337 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 PPP1R3CQ9UQK1 317 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 AP3M1Q9Y2T2 418 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 LRRC42Q9Y546 428 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 LYVE1Q9Y5Y7 322 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 VPS13BQ7Z7G8 4022 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 A0A1W2PQD3 144 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 TCRBV7S3A2A0A539 114 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 PLSCR5A0PG75 271 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 MAGEB16A2A368 324 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 SH2D7A6NKC9 451 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 A8MZ25 164 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 C12orf77C9JDV5 145 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 E9PBE3 544 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 M0R3H8 397 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 PSMD9O00233 223 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 RAD51CO43502 376 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 DNPH1O43598 174 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 STK16O75716 305 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 GAS8-AS1O95177 125 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 KRT75O95678 551 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 BAG2O95816 211 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 SCGB1D2O95969 90 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 MBPP02686 304 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 GSTA1P08263 222 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 ATP6V1B1P15313 513 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 PHBP35232 272 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 MAP3K8P41279 467 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 EIF2B2P49770 351 aaKnown RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 GDI2P50395 445 aaKnown RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 HTR6P50406 440 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 P2RX1P51575 399 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 PSMD4P55036 377 aaKnown RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 AQP5P55064 265 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 RPS16P62249 146 aaKnown RBP3.8□□□□□ -1.8
SDCBP-205ENST00000447267 CFHR3Q02985 330 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 C2orf54Q08AI8 447 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 COTL1Q14019 142 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 QPRTQ15274 297 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 TWIST1Q15672 202 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 SGCAQ16586 387 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 MRGPRG-AS1Q2M3A8 158 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF404Q494X3 552 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 LELP1Q5T871 98 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 LIN54Q6MZP7 749 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 C11orf63Q6NUN7 778 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 NIPAL3Q6P499 406 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 C9orf47Q6ZRZ4 202 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 VRK2Q86Y07 508 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF584Q8IVC4 421 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 CROCCP3Q8IVE0 287 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 FGFRL1Q8N441 504 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF680Q8NEM1 530 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 OR9K2Q8NGE7 335 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 FGFBP3Q8TAT2 258 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 TEX47Q8TBZ9 253 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 FANK1Q8TC84 345 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 AGR3Q8TD06 166 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 FRZBQ92765 325 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 EME1Q96AY2 570 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 TM4SF18Q96CE8 201 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 SAMD8Q96LT4 415 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 TMEM68Q96MH6 324 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 ATF6BQ99941 703 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 TM2D2Q9BX73 214 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 EBPLQ9BY08 206 aa3.8□□□□□ -1.8
SDCBP-205ENST00000447267 SP140LQ9H930 580 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms