RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 NUP214P35658 2090 aaPredicted RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 MYH8P13535 1937 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 PLXNA3P51805 1871 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CDK5RAP2Q96SN8 1893 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 EPG5Q9HCE0 2579 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 RPAP1Q9BWH6 1393 aaPredicted RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 NLRC5Q86WI3 1866 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 IGLV2-18A0A075B6J9 118 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 TRBV11-1A0A0K0K1C0 115 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 PRSS37A4D1T9 235 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 A8MXQ7 604 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 RBBP9O75884 186 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 OR2F2O95006 317 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 DIRAS1O95057 198 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 GAPDHP04406 335 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 IVLP07476 585 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 CSF3P09919 207 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 CISD3P0C7P0 127 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 TLX1NBP0CAT3 122 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 UBTFL6P0CB48 400 aaPredicted RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 GKN3PP0CG01 181 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 ATP1B2P14415 290 aaPredicted RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 PRKACAP17612 351 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 IL12AP29459 219 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 HNRNPH3P31942 346 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 RDXP35241 583 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 NUP62P37198 522 aaPredicted RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 RPL13AP40429 203 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 NAMPTP43490 491 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 GYG1P46976 350 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 QARSP47897 775 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 PLP1P60201 277 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 KLRB1Q12918 225 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 FZD2Q14332 565 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 DUSP7Q16829 419 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 HIKESHIQ53FT3 197 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 HSP90B2PQ58FF3 399 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 COA6Q5JTJ3 125 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 TMEM53Q6P2H8 277 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 UQCC3Q6UW78 93 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 HMGN2P46Q86SG4 172 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 SCD5Q86SK9 330 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 OR7G2Q8NG99 324 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 SYNPRQ8TBG9 265 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 GLYATL2Q8WU03 294 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 ZNF707Q96C28 371 aaPredicted RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 LRRC39Q96DD0 335 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 IFT74Q96LB3 600 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 PRRC1Q96M27 445 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 OXGR1Q96P68 337 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 MRPL37Q9BZE1 423 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 CHMP4BQ9H444 224 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 NHEJ1Q9H9Q4 299 aaPredicted RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 NOX3Q9HBY0 568 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 SLC40A1Q9NP59 571 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 ZNF629Q9UEG4 869 aaPredicted RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 SLC7A8Q9UHI5 535 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 IKZF2Q9UKS7 526 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 VANGL2Q9ULK5 521 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 TBC1D24Q9ULP9 559 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 MMP17Q9ULZ9 603 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 STK38LQ9Y2H1 464 aa2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 KMT2BQ9UMN6 2715 aaPredicted RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 TPRP12270 2363 aaKnown RBP2.27□□□□□ -2.05
AC003001.1-201ENST00000443247 RALGAPA2Q2PPJ7 1873 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 PRRC2BQ5JSZ5 2229 aaKnown RBP2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 MAP1BP46821 2468 aaKnown RBP2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 NFASCO94856 1347 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 IGSF9BQ9UPX0 1349 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 CACNA1HO95180 2353 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 LOC100653049A0A140TA62 436 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 SMCO3A2RU48 225 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 GABRR3A8MPY1 467 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 TRDMT1O14717 391 aaKnown RBP2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 NVLO15381 856 aaKnown RBP2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 RAMP3O60896 148 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 KRT34O76011 436 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 H6PDO95479 791 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 C6orf47O95873 294 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 CSTAP01040 98 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 NPPAP01160 153 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 IGHV3-43DP0DP04 118 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 CCNB1P14635 433 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 MUC1P15941 1255 aaPredicted RBP2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 PGAM1P18669 254 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 TNNI1P19237 187 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 SRMP19623 302 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 MSR1P21757 451 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 TUBG1P23258 451 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 NPY1RP25929 384 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 TGFBIQ15582 683 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 ZBED5Q49AG3 693 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 C1orf220Q5T0J3 134 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 KPRPQ5T749 579 aaPredicted RBP2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 PLCXD3Q63HM9 321 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 SSX9Q7RTT3 188 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 PGAM4Q8N0Y7 254 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 PQLC3Q8N755 202 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 FNDC5Q8NAU1 212 aa2.26□□□□□ -2.05
AC003001.1-201ENST00000443247 SDR9C7Q8NEX9 313 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms