RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 GLCEO94923 617 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 BCL10O95999 233 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 IGHMP01871 453 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 GYPBP06028 91 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SBK2P0C263 348 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 CLUP10909 449 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SPI1P17947 270 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 CNR1P21554 472 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC2A5P22732 501 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 GADD45AP24522 165 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 FKBP2P26885 142 aaKnown RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SRD5A2P31213 254 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PYCR1P32322 319 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 NAA10P41227 235 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 CAPZA2P47755 286 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SERPINB10P48595 397 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ETV1P50549 477 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 RAP1BP61224 184 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 RPL27P61353 136 aaKnown RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 LSM3P62310 102 aaKnown RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 LCN6P62502 163 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ACTA2P62736 377 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 RAP1AP62834 184 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ACTG2P63267 376 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 CSNK2A1P68400 391 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC35A1P78382 337 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ARG2P78540 354 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PUDPQ08623 228 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 CDC20Q12834 499 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 MLLT11Q13015 90 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 IRF3Q14653 427 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PON3Q15166 354 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SPHARQ15513 63 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 TGIF1Q15583 401 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR1C1Q15619 314 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 MESTQ5EB52 335 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC25A53Q5H9E4 307 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PAPPA-AS1Q5QFB9 102 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PDSS1Q5T2R2 415 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2G6Q5TZ20 316 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 AGAP7PQ5VUJ5 663 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 AADACL4Q5VUY2 407 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM205BPQ63HN1 556 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 TIGD3Q6B0B8 471 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 H3F3CQ6NXT2 135 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ADCK1Q86TW2 530 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 GPAT4Q86UL3 456 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ERI1Q8IV48 349 aaKnown RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC35F2Q8IXU6 374 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ACBD7Q8N6N7 88 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 LRRC75AQ8NAA5 344 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR4F15Q8NGB8 312 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR51L1Q8NGJ5 315 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR5M1Q8NGP8 315 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR6N2Q8NGY6 317 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR52N1Q8NH53 320 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 MFSD8Q8NHS3 518 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SPRYD4Q8WW59 207 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 KCNE4Q8WWG9 221 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 TAAR8Q969N4 342 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 TRIM63Q969Q1 353 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PNPLA2Q96AD5 504 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZMYND19Q96E35 227 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 YIPF6Q96EC8 236 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 KLHL15Q96M94 604 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 AGAP4Q96P64 663 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OPALINQ96PE5 141 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 TSPAN32Q96QS1 320 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR5M11Q96RB7 305 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 NMNAT3Q96T66 252 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 MGLLQ99685 303 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM173AQ9BQD7 235 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PIGQQ9BRB3 760 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 CHCHD6Q9BRQ6 235 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 NAA11Q9BSU3 229 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 CDCA4Q9BXL8 241 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 POTEKPQ9BYX7 375 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 TTTY10Q9BZA0 68 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 NAA50Q9GZZ1 169 aaKnown RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 EXO5Q9H790 373 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ADGRL4Q9HBW9 690 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 ASCL3Q9NQ33 180 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 RPRD1BQ9NQG5 326 aaKnown RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 INPP5EQ9NRR6 644 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 MRPL39Q9NYK5 338 aaKnown RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 STMN3Q9NZ72 180 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PEMTQ9UBM1 199 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 SEC14L4Q9UDX3 406 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 MOKQ9UQ07 419 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 EXOGQ9Y2C4 368 aaKnown RBP3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 HDGFL3Q9Y3E1 203 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 A3GALT2U3KPV4 340 aa3.33□□□□□ -1.88
HMGB3P20-201ENST00000417997 PCNX3Q9H6A9 2034 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 KNL1Q8NG31 2342 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZDBF2Q9HCK1 2354 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 A0A0G2JMM0 328 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 A0A1W2PPB8 328 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 A0A1W2PRS3 328 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2M5A3KFT3 312 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms