RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ZNF501Q96CX3 271 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-203ENST00000409101 C4orf45Q96LM5 186 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 TAAR6Q96RI8 345 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 NIPSNAP1Q9BPW8 284 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 C20orf27Q9GZN8 174 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 BANF2Q9H503 90 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 FOXJ2Q9P0K8 574 aa4.51□□□□□ -1.69
SCN3A-203ENST00000409101 TRAV38-1A0A0B4J264 116 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 F2RL2O00254 374 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 PHF1O43189 567 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 CCL3P10147 92 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 RPA2P15927 270 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 F2RP25116 425 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 DDOSTP39656 456 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF74Q16587 644 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF620Q6ZNG0 422 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF679Q8IYX0 411 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 DPF1Q92782 380 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 WDR34Q96EX3 536 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 MAELQ96JY0 434 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 FYTTD1Q96QD9 318 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 TEAD3Q99594 435 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SF3B5Q9BWJ5 86 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 KCNIP2Q9NS61 270 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 B9D1Q9UPM9 204 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 TMEM30CPA0ZSE6 113 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ARPC1BO15143 372 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 EML2O95834 649 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ZNF17P17021 662 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 S100A2P29034 98 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 RELAQ04206 551 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 PABPC1L2AQ5JQF8 200 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 METTL11BQ5VVY1 283 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 TEX37Q96LM6 180 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 UHRF2Q96PU4 802 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 MS4A7Q9GZW8 240 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 OR51E2Q9H255 320 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SIAEQ9HAT2 523 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 EXOSC3Q9NQT5 275 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 CMC2Q9NRP2 79 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ATAD5Q96QE3 1844 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ZC3H12DA2A288 527 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 MSTNO14793 375 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 LYRM1O43325 122 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ANGPTL7O43827 346 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 GOSR1O95249 250 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 MT-ND4P03905 459 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 HOXB5P09067 269 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 POU3F3P20264 500 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 CA6P23280 308 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 THBS4P35443 961 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 CD96P40200 585 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 MTNR1BP49286 362 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 NPY4RP50391 375 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 HCCSP53701 268 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 CLDN12P56749 244 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 RAC3P60763 192 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 EBPQ15125 230 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 MPPED2Q15777 294 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 VMA21Q3ZAQ7 101 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 LCN10Q6JVE6 187 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 LRRC28Q86X40 367 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 OIT3Q8WWZ8 545 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 PHYHIPQ92561 330 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ARHGDIGQ99819 225 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 BARX1Q9HBU1 254 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 CGGBP1Q9UFW8 167 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 A0A1W2PQD3 144 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 A1L4Q6 167 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SDCBPO00560 298 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SMAD7O15105 426 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 PRAF2O60831 178 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 TGM6O95932 706 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SRMP19623 302 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 APEX1P27695 318 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ETV6P41212 452 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SNRPGP62308 76 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 ERHP84090 104 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 PMP22Q01453 160 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 FAM198BQ6UWH4 519 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SSX9Q7RTT3 188 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 OR52N1Q8NH53 320 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 RAB33BQ9H082 229 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SAP30LQ9HAJ7 183 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SLC23A1Q9UHI7 598 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 GPR37O15354 613 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SULT1C4O75897 302 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 CRYZL1O95825 349 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SNRPBP14678 240 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 GPR6P46095 362 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 RAE1P78406 368 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 GGTLC2Q14390 218 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 KRBOX4Q5JUW0 171 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 FAM74A1Q5RGS3 127 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 TMEM81Q6P7N7 255 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 SLC25A26Q70HW3 274 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 BCDIN3DQ7Z5W3 292 aaKnown RBP4.5□□□□□ -1.69
SCN3A-203ENST00000409101 CMTM2Q8TAZ6 248 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 LGALS14Q8TCE9 139 aa4.5□□□□□ -1.69
SCN3A-203ENST00000409101 MCHR2Q969V1 340 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms