RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SPTSSAQ969W0 71 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 SLC25A28Q96A46 364 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 DEFB127Q9H1M4 99 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 SLC17A5Q9NRA2 495 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 ZNF319Q9P2F9 582 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 NLKQ9UBE8 527 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 CGGBP1Q9UFW8 167 aaPredicted RBP16.66■□□□□ 0.26
USP39-202ENST00000409025 CUL9Q8IWT3 2517 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 CENPXA8MT69 81 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 GABARAPH6UMI1 98 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 FAM157BP0CG42 384 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 CCL1P22362 96 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 SLC6A9P48067 706 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 SRP9P49458 86 aaKnown RBP16.66■□□□□ 0.26
USP39-202ENST00000409025 SCRN3Q0VDG4 424 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 RAB35Q15286 201 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 C1orf100Q5SVJ3 147 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 RSBN1Q5VWQ0 802 aaPredicted RBP16.66■□□□□ 0.26
USP39-202ENST00000409025 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.66■□□□□ 0.26
USP39-202ENST00000409025 DRAXINQ8NBI3 349 aaPredicted RBP16.66■□□□□ 0.26
USP39-202ENST00000409025 SLCO5A1Q9H2Y9 848 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 TMEM138Q9NPI0 162 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 NPAP1Q9NZP6 1156 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 LIPGQ9Y5X9 500 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 LOC390937A0A1W2PQ73 354 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 MEIOCA2RUB1 952 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 ZNF891A8MT65 544 aaPredicted RBP16.65■□□□□ 0.26
USP39-202ENST00000409025 SGCEO43556 437 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 B4GALT1P15291 398 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 ARSBP15848 533 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 RAB3AP20336 220 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 OTX1P32242 354 aaPredicted RBP16.65■□□□□ 0.26
USP39-202ENST00000409025 TAS2R20P59543 309 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 PLA2G7Q13093 441 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 CLN3Q13286 438 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 ANKRD16Q6P6B7 361 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 ZNF813Q6ZN06 617 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 AKAP14Q86UN6 197 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 FNDC9Q8TBE3 224 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 FCAMRQ8WWV6 532 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 FAM71F1Q96KD3 344 aaPredicted RBP16.65■□□□□ 0.26
USP39-202ENST00000409025 SORCS2Q96PQ0 1159 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 LINC00470Q9BZP3 86 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 AUNIPQ9H7T9 357 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 PLEKHA1Q9HB21 404 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 DIABLOQ9NR28 239 aa16.65■□□□□ 0.26
USP39-202ENST00000409025 TRGV5A0A0B4J1U4 118 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 TMEM272A0A1B0GTI8 110 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 XRCC3O43542 346 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 TMIGD3P0DMS9 266 aaPredicted RBP16.64■□□□□ 0.26
USP39-202ENST00000409025 CAPZA1P52907 286 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 ECH1Q13011 328 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 CAMK2BQ13554 666 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 GFOD2Q3B7J2 385 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 GLCCI1Q86VQ1 547 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 SIAH3Q8IW03 269 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 TUSC5Q8IXB3 177 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 SLC22A24Q8N4F4 322 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 PHF21AQ96BD5 680 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 NKX3-1Q99801 234 aaPredicted RBP16.64■□□□□ 0.26
USP39-202ENST00000409025 RNF122Q9H9V4 155 aa16.64■□□□□ 0.26
USP39-202ENST00000409025 ZNF724A8MTY0 619 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 M0R135 149 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 CTAG2O75638 210 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 ERCC1P07992 297 aaPredicted RBP16.64■□□□□ 0.25
USP39-202ENST00000409025 SLC6A1P30531 599 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 GDNFP39905 211 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 EFNB2P52799 333 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 PCBD1P61457 104 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 CD300CQ08708 224 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 RNPS1Q15287 305 aaKnown RBP16.64■□□□□ 0.25
USP39-202ENST00000409025 RSPO1Q2MKA7 263 aaPredicted RBP16.64■□□□□ 0.25
USP39-202ENST00000409025 DEFB109BQ30KR1 87 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 TSPO2Q5TGU0 170 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 MTFR2Q6P444 385 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 IGFL2Q6UWQ7 119 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 PLXDC2Q6UX71 529 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 PGAP1Q75T13 922 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 NAA40Q86UY6 237 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 ZNF799Q96GE5 643 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 C7orf50Q9BRJ6 194 aaKnown RBP16.64■□□□□ 0.25
USP39-202ENST00000409025 ZDHHC11Q9H8X9 412 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 CALHM2Q9HA72 323 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 CSAG2Q9Y5P2 127 aa16.64■□□□□ 0.25
USP39-202ENST00000409025 FREM2Q5SZK8 3169 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 A0A0U1RQV5 110 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 OR6C65A6NJZ3 312 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 ORC5O43913 435 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 C3AR1Q16581 482 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 RNFT1Q5M7Z0 435 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 ZNF529Q6P280 563 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 SLC16A14Q7RTX9 510 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 LYPD6Q86Y78 171 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 MCEMP1Q8IX19 187 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 OR13C9Q8NGT0 318 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 OR52I2Q8NH67 350 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 SLC7A6Q92536 515 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 ITPKCQ96DU7 683 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 SOX7Q9BT81 388 aa16.63■□□□□ 0.25
USP39-202ENST00000409025 KCNK15Q9H427 330 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms