RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 GPAT4Q86UL3 456 aa16.04■□□□□ 0.16
CD40-201ENST00000372276 MUC20Q8N307 709 aaPredicted RBP16.04■□□□□ 0.16
CD40-201ENST00000372276 BPIFB2Q8N4F0 458 aa16.04■□□□□ 0.16
CD40-201ENST00000372276 C12orf45Q8N5I9 185 aaPredicted RBP16.04■□□□□ 0.16
CD40-201ENST00000372276 OR4D6Q8NGJ1 314 aa16.04■□□□□ 0.16
CD40-201ENST00000372276 OR1J2Q8NGS2 313 aa16.04■□□□□ 0.16
CD40-201ENST00000372276 OR8S1Q8NH09 359 aa16.04■□□□□ 0.16
CD40-201ENST00000372276 CA10Q9NS85 328 aa16.04■□□□□ 0.16
CD40-201ENST00000372276 GHRLQ9UBU3 117 aa16.04■□□□□ 0.16
CD40-201ENST00000372276 FBXL2Q9UKC9 423 aa16.04■□□□□ 0.16
CD40-201ENST00000372276 PI4KAP42356 2102 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 D6RAR5 112 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 RAB27BO00194 218 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 NTN3O00634 580 aaPredicted RBP16.03■□□□□ 0.16
CD40-201ENST00000372276 TOXO94900 526 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 OR4E1P0C645 316 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 ZNF93P35789 620 aaPredicted RBP16.03■□□□□ 0.16
CD40-201ENST00000372276 SSR4P51571 173 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 CSRP2Q16527 193 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 ACTBL2Q562R1 376 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 RNASE10Q5GAN6 216 aaKnown RBP16.03■□□□□ 0.16
CD40-201ENST00000372276 C3P1Q6ZMU1 363 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 NAXDQ8IW45 347 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 OR4D10Q8NGI6 311 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 OR10S1Q8NGN2 331 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 KCNG3Q8TAE7 436 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 ELMOD3Q96FG2 381 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 SLX1AQ9BQ83 275 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 POFUT1Q9H488 388 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 TRIOO75962 3097 aa16.03■□□□□ 0.16
CD40-201ENST00000372276 A0A1B0GTI1 187 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 SHISA8B8ZZ34 492 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 MPC2O95563 127 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 GSTP1P09211 210 aaKnown RBP16.02■□□□□ 0.16
CD40-201ENST00000372276 QDPRP09417 244 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 S100A11P31949 105 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 QRFPP83859 136 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 ZFP36L1Q07352 338 aaKnown RBP16.02■□□□□ 0.16
CD40-201ENST00000372276 SIGLEC14Q08ET2 396 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 C10orf128Q5T292 105 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 LCN10Q6JVE6 187 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 LIN54Q6MZP7 749 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 C11orf88Q6PI97 169 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 ARMC10Q8N2F6 343 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 MR1Q95460 341 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 NTNG2Q96CW9 530 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 C10orf35Q96D05 121 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 GLTPQ9NZD2 209 aa16.02■□□□□ 0.16
CD40-201ENST00000372276 TEX51A0A1B0GUA7 166 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 TMEM14DPA8MWL7 114 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 ZNF735P0CB33 412 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 PPP3CBP16298 524 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 SSTR2P30874 369 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 CBX5P45973 191 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 EIF1AXP47813 144 aaKnown RBP16.01■□□□□ 0.15
CD40-201ENST00000372276 H3F3AP84243 136 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 SRSF4Q08170 494 aaKnown RBP16.01■□□□□ 0.15
CD40-201ENST00000372276 GK2Q14410 553 aaPredicted RBP16.01■□□□□ 0.15
CD40-201ENST00000372276 ARL6IP1Q15041 203 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 PNLIPRP3Q17RR3 467 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 CDNFQ49AH0 187 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 CFAP77Q6ZQR2 320 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 FOXL2NBQ6ZUU3 175 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 WDFY1Q8IWB7 410 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 CCDC28AQ8IWP9 274 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 GJC3Q8NFK1 279 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 OR52N4Q8NGI2 321 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 OR2Y1Q8NGV0 311 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 PAQR8Q8TEZ7 354 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 ADAT3Q96EY9 351 aaPredicted RBP16.01■□□□□ 0.15
CD40-201ENST00000372276 MESP1Q9BRJ9 268 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 KCNK15Q9H427 330 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 MED9Q9NWA0 146 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 PTRH2Q9Y3E5 179 aaKnown RBP16.01■□□□□ 0.15
CD40-201ENST00000372276 A0A1W2PNR3 127 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 GOSR2O14653 212 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 RP2O75695 350 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 CFIP05156 583 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 ICAM2P13598 275 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 MSR1P21757 451 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 CALCRP30988 508 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 CSNK1A1P48729 337 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 OR52B4Q8NGK2 314 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 OR10R2Q8NGX6 335 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 DVL3Q92997 716 aaPredicted RBP16.01■□□□□ 0.15
CD40-201ENST00000372276 TMEM54Q969K7 222 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 SGCZQ96LD1 299 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 SFXN2Q96NB2 322 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 IFT46Q9NQC8 304 aa16.01■□□□□ 0.15
CD40-201ENST00000372276 MEIS3P1A6NDR6 274 aa16■□□□□ 0.15
CD40-201ENST00000372276 RFPL4AA6NLU0 287 aa16■□□□□ 0.15
CD40-201ENST00000372276 RFPL4AL1F8VTS6 287 aa16■□□□□ 0.15
CD40-201ENST00000372276 SHOXO15266 292 aa16■□□□□ 0.15
CD40-201ENST00000372276 CBR3O75828 277 aa16■□□□□ 0.15
CD40-201ENST00000372276 VSIG8P0DPA2 414 aa16■□□□□ 0.15
CD40-201ENST00000372276 COX6A1P12074 109 aa16■□□□□ 0.15
CD40-201ENST00000372276 TDGF1P13385 188 aa16■□□□□ 0.15
CD40-201ENST00000372276 LIFP15018 202 aa16■□□□□ 0.15
CD40-201ENST00000372276 RPA2P15927 270 aa16■□□□□ 0.15
CD40-201ENST00000372276 HLA-GP17693 338 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms