RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 FOXF1Q12946 379 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 SNTB1Q13884 538 aaKnown RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 NDUFAF6Q330K2 333 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ELOA3BQ3SY89 546 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 C1QTNF12Q5T7M4 302 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 C5orf46Q6UWT4 87 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 THSD4Q6ZMP0 1018 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 FAM214BQ7L5A3 538 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 MEX3DQ86XN8 651 aaKnown RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 TGIF2LYQ8IUE0 185 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 SPICQ8N5J4 248 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ELOA3Q8NG57 546 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 OR6K3Q8NGY3 331 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 OR2T4Q8NH00 348 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 OR10D3Q8NH80 312 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ASB17Q8WXJ9 295 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 SNAPC3Q92966 411 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 CPNE4Q96A23 557 aaPredicted RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ARSGQ96EG1 525 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 PELI1Q96FA3 418 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 GMPPAQ96IJ6 420 aaPredicted RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ADAD1Q96M93 576 aaKnown RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ABHD1Q96SE0 405 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 NMNAT2Q9BZQ4 307 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 COMMD4Q9H0A8 199 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 LIME1Q9H400 295 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 MED20Q9H944 212 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 SLC17A5Q9NRA2 495 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 KCNE5Q9UJ90 142 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF222Q9UK12 451 aa9.17□□□□□ -0.94
COL5A1-202ENST00000371820 SIRT4Q9Y6E7 314 aaPredicted RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 HRNRQ86YZ3 2850 aaPredicted RBP9.17□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF469Q96JG9 3925 aaPredicted RBP9.16□□□□□ -0.94
COL5A1-202ENST00000371820 TRAV27A0A087WT01 109 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 A0A0B4J293 547 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 A0A1B0GW55 424 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 IFITM5A6NNB3 132 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 A8MV72 311 aaPredicted RBP9.16□□□□□ -0.94
COL5A1-202ENST00000371820 SHISA8B8ZZ34 492 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 H0YC42 278 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 TNFSF11O14788 317 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 FABP7O15540 132 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 DUX4L2P0CJ85 424 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 DUX4L3P0CJ86 424 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 DUX4L4P0CJ87 422 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 DUX4L5P0CJ88 424 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 DUX4L6P0CJ89 424 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 DUX4L7P0CJ90 424 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 SULT1A3P0DMM9 295 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 SULT1A4P0DMN0 295 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 HIST1H1CP16403 213 aaKnown RBP9.16□□□□□ -0.94
COL5A1-202ENST00000371820 PGCP20142 388 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 SFTPDP35247 375 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 HTR2BP41595 481 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 KIR2DL2P43627 348 aaPredicted RBP9.16□□□□□ -0.94
COL5A1-202ENST00000371820 OR3A3P47888 321 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 AP2S1P53680 142 aaPredicted RBP9.16□□□□□ -0.94
COL5A1-202ENST00000371820 GSG1Q2KHT4 349 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 Q499Y3 187 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 SLC25A53Q5H9E4 307 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 C6orf183Q5T699 404 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 ZBTB37Q5TC79 503 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 VWA1Q6PCB0 445 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 LYPD4Q6UWN0 246 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 PLXDC2Q6UX71 529 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 CADM2Q8N3J6 435 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 NPEPL1Q8NDH3 523 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 OR8H1Q8NGG4 311 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 ST8SIA1Q92185 356 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 STARD4Q96DR4 205 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 ADGRG7Q96K78 797 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 DDOQ99489 341 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 LAT2Q9GZY6 243 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 SERINC1Q9NRX5 453 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 DUX4Q9UBX2 424 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 GNG8Q9UK08 70 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 MGAT4AQ9UM21 535 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 HIF3AQ9Y2N7 669 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 ABCA4P78363 2273 aa9.16□□□□□ -0.94
COL5A1-202ENST00000371820 ACANP16112 2415 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 A0A1W2PRG6 482 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 SMIM30A4D0T7 59 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 MEGF11A6BM72 1044 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 TMEM212A6NML5 194 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 E9PI62 339 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 SULT1C2O00338 296 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 SHOXO15266 292 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 SSNA1O43805 119 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 CXCL13O43927 109 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 SS18L1O75177 396 aaPredicted RBP9.15□□□□□ -0.94
COL5A1-202ENST00000371820 RBBP9O75884 186 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 RGS11O94810 467 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 PAHP00439 452 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 MRPL3P09001 348 aaKnown RBP9.15□□□□□ -0.94
COL5A1-202ENST00000371820 IFNGR1P15260 489 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 SPI1P17947 270 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 KLK2P20151 261 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 DNASE1P24855 282 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 GIFP27352 417 aa9.15□□□□□ -0.94
COL5A1-202ENST00000371820 SDHAP31040 664 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms