RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GTSF1Q8WW33 167 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 RAD51AP1Q96B01 352 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 SH3YL1Q96HL8 342 aaPredicted RBP4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 FOXN4Q96NZ1 517 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR5B2Q96R09 309 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR5M11Q96RB7 305 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 UTP23Q9BRU9 249 aaKnown RBP4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 TSSK1BQ9BXA7 367 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 DRC3Q9H069 523 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 NAT10Q9H0A0 1025 aaKnown RBP4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 CHRAC1Q9NRG0 131 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 C14orf105Q9NVL8 296 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 DPM3Q9P2X0 92 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 TAC3Q9UHF0 121 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 ZNF221Q9UK13 617 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 SAMD4AQ9UPU9 718 aaKnown RBP4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 DOCK10Q96BY6 2186 aa4.21□□□□□ -1.73
RNU4-39P-201ENST00000362455 CSPG4Q6UVK1 2322 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 KCNE1BA0A087WTH5 132 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 IGHV3-35A0A0C4DH35 117 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 A0A0G2JMM0 328 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 A0A1W2PPB8 328 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 A0A1W2PRS3 328 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 METTL21EPA6NDL7 271 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 KIR3DP1A8MWS1 328 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 GOLGA8KD6RF30 607 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 G3V4G9 280 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 GOLGA8TH3BQL2 631 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR7A17O14581 309 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 PRMT5O14744 637 aaPredicted RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 NIPSNAP2O75323 286 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 PSIP1O75475 530 aaKnown RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 NSA2O95478 260 aaKnown RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 TSPAN12O95859 305 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF24P17028 368 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 IL1RNP18510 177 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 COILP38432 576 aaPredicted RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 SLC25A1P53007 311 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 MLF1P58340 268 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 BTG2P78543 158 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 CRADDP78560 199 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 RELAQ04206 551 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 ACSBG2Q5FVE4 666 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 C2orf66Q6UXQ4 117 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 CYHR1Q6ZMK1 362 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 C16orf47Q6ZP98 133 aaPredicted RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPS19BP1Q86WX3 136 aaKnown RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 CDKL3Q8IVW4 592 aaPredicted RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 CNPY4Q8N129 248 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 C15orf54Q8N8G6 183 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 PLPP5Q8NEB5 264 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 OR9A1PQ8NGU1 263 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 RHOXF1Q8NHV9 184 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 TYMSOSQ8TAI1 123 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 EMG1Q92979 244 aaKnown RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 TM4SF19Q96DZ7 209 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 PELI1Q96FA3 418 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 CCDC42Q96M95 316 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 PRAP1Q96NZ9 151 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 NXF5Q9H1B4 397 aaKnown RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 PPDPFQ9H3Y8 114 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 IKZF5Q9H5V7 419 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 LRRC40Q9H9A6 602 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 MRPS30Q9NP92 439 aaKnown RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 TREX1Q9NSU2 369 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 PAK1IP1Q9NWT1 392 aaPredicted RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 PCYOX1Q9UHG3 505 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 GNPTGQ9UJJ9 305 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF223Q9UK11 482 aaPredicted RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 FAM215AQ9Y5M1 114 aa4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 NCOA6Q14686 2063 aaPredicted RBP4.21□□□□□ -1.74
RNU4-39P-201ENST00000362455 IGKV3D-11A0A0A0MRZ8 115 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 ZNF860A6NHJ4 632 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 C4orf51C9J302 202 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 NPIPA7E9PJI5 369 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 ARPC3O15145 178 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 SNNO75324 88 aaPredicted RBP4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 RDH16O75452 317 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPN2P04844 631 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 ANXA5P08758 320 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 H2BFMP0C1H6 154 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 NPIPA8P0DM63 369 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 SERPINA2P20848 420 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 RPS3P23396 243 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 CMPK1P30085 196 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 MAGEA1P43355 309 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 HLCSP50747 726 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 OC90Q02509 493 aaPredicted RBP4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 CDH17Q12864 832 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 ASAH1Q13510 395 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 NSDHLQ15738 373 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 KLHL38Q2WGJ6 581 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 MAJINQ3KP22 176 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 PAN3Q58A45 887 aaKnown RBP4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 ATAD3CQ5T2N8 411 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 SLC22A10Q63ZE4 541 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 TMEM225Q6GV28 225 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 CGB2Q6NT52 195 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 SLC26A11Q86WA9 606 aa4.2□□□□□ -1.74
RNU4-39P-201ENST00000362455 CDC20BQ86Y33 519 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms