RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TSPAN15O95858 294 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 SLC2A1P11166 492 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 SSBP1Q04837 148 aaKnown RBP13.12□□□□□ -0.31
COL6A2-201ENST00000300527 DRAM2Q6UX65 266 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 RNF144BQ7Z419 303 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 DCXRQ7Z4W1 244 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 ATG4DQ86TL0 474 aaPredicted RBP13.12□□□□□ -0.31
COL6A2-201ENST00000300527 LURAP1LQ8IV03 231 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 SKA3Q8IX90 412 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF321PQ8N8H1 164 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 OR5D18Q8NGL1 313 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 RNF128Q8TEB7 428 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 NPRL2Q8WTW4 380 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 EDEM2Q9BV94 578 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 RAB33BQ9H082 229 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
COL6A2-201ENST00000300527 WIPF3A6NGB9 483 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 GPR89AB7ZAQ6 455 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 RAB27BO00194 218 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 CLN5O75503 358 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 GPR89BP0CG08 455 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 OR13C7P0DN81 318 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 PNMTP11086 282 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 OR3A2P47893 321 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 SCAND1P57086 179 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 ECH1Q13011 328 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 C1orf61Q13536 156 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF141Q15928 474 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 PAQR4Q8N4S7 273 aaPredicted RBP13.12□□□□□ -0.31
COL6A2-201ENST00000300527 TMEM104Q8NE00 496 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
COL6A2-201ENST00000300527 OR52A1Q9UKL2 312 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 CLEC18BQ6UXF7 455 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 WDSUB1Q8N9V3 476 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 LRRC75AQ8NAA5 344 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 AKR7LQ8NHP1 331 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 TCTEX1D2Q8WW35 142 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 GPER1Q99527 375 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 THAP10Q9P2Z0 257 aaPredicted RBP13.12□□□□□ -0.31
COL6A2-201ENST00000300527 FBXO7Q9Y3I1 522 aa13.12□□□□□ -0.31
COL6A2-201ENST00000300527 A0A1W2PP11 408 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 C7orf77A4D0Y5 90 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 YIF1AO95070 293 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 GLRA1P23415 457 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 GJA4P35212 333 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 RAB38P57729 211 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ANGPTL5Q86XS5 388 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 GPR119Q8TDV5 335 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 MMABQ96EY8 250 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-201ENST00000300527 FOXQ1Q9C009 403 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 SLC17A5Q9NRA2 495 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 C5orf52A6NGY3 159 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF264O43296 627 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF354AO60765 605 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-201ENST00000300527 S100PP25815 95 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF260Q3ZCT1 412 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ARMC6Q6NXE6 501 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ST7LQ8TDW4 575 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 JSRP1Q96MG2 331 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-201ENST00000300527 LMF2Q9BU23 707 aaKnown RBP13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ELL3Q9HB65 397 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-201ENST00000300527 WIF1Q9Y5W5 379 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 PUS1Q9Y606 427 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL6A2-201ENST00000300527 SPAG17Q6Q759 2223 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 C1QL1O75973 258 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ASAH2BP0C7U1 165 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 AMY2BP19961 511 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 FHITP49789 147 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF561Q8N587 486 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 MAP3K3Q99759 626 aa13.11□□□□□ -0.31
COL6A2-201ENST00000300527 PHYHO14832 338 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 H2BFMP0C1H6 154 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 RPS10P46783 165 aaKnown RBP13.1□□□□□ -0.31
COL6A2-201ENST00000300527 CYCSP99999 105 aaKnown RBP13.1□□□□□ -0.31
COL6A2-201ENST00000300527 INSM1Q01101 510 aaPredicted RBP13.1□□□□□ -0.31
COL6A2-201ENST00000300527 TSC22D1Q15714 1073 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 ANKRD55Q3KP44 614 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 FAM166AQ6J272 317 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF704Q6ZNC4 412 aaPredicted RBP13.1□□□□□ -0.31
COL6A2-201ENST00000300527 ZDHHC22Q8N966 263 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 EDARADDQ8WWZ3 215 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 GPX7Q96SL4 187 aaPredicted RBP13.1□□□□□ -0.31
COL6A2-201ENST00000300527 POLR1DQ9Y2S0 133 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 KIAA0100Q14667 2235 aaKnown RBP13.1□□□□□ -0.31
COL6A2-201ENST00000300527 PRSS37A4D1T9 235 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 F8VVB4 439 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 F8VWA3 439 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 C5AR1P21730 350 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 SKP2Q13309 424 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 UNC119Q13432 240 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 CCINQ13939 588 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 YAF2Q8IY57 180 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 ZNF565Q8N9K5 539 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 PDE7BQ9NP56 450 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 TMEM100Q9NV29 134 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 RAB22AQ9UL26 194 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 MMP24Q9Y5R2 645 aa13.1□□□□□ -0.31
COL6A2-201ENST00000300527 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms