RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 C7orf72A4D263 438 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 TRABD2BA6NFA1 517 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 MAST2Q6P0Q8 1798 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 ADRA2CP18825 462 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 CDAP32320 146 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 OPRM1P35372 400 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF628Q5EBL2 1059 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 ELFN2Q5R3F8 820 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 KMT5CQ86Y97 462 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 KCNRGQ8N5I3 272 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 R4GN57 208 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF724A8MTY0 619 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 SDHBP21912 280 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 SNRPGP62308 76 aaKnown RBP12.01□□□□□ -0.49
COL1A1-201ENST00000225964 SMIM21Q3B7S5 101 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 OR13C8Q8NGS7 320 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 RHOXF1Q8NHV9 184 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 PHYHIPQ92561 330 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 SLC2A8Q9NY64 477 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF391Q9UJN7 358 aa12.01□□□□□ -0.49
COL1A1-201ENST00000225964 PRSS37A4D1T9 235 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 SDCBPO00560 298 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 DRAM2Q6UX65 266 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 AKR7LQ8NHP1 331 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 GPR119Q8TDV5 335 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 NUDT8Q8WV74 236 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 TOGARAM1Q9Y4F4 1720 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 CBR3O75828 277 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF121P58317 390 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 FOXF1Q12946 379 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 HAGHQ16775 308 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 DHRS13Q6UX07 377 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF251Q9BRH9 671 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 C11orf54Q9H0W9 315 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 PSENENQ9NZ42 101 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 SPRY1O43609 319 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 RBP4P02753 201 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 GPR3P46089 330 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 MEOX1P50221 254 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 FCN2Q15485 313 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 OR2A2Q6IF42 318 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 DRAXINQ8NBI3 349 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 GPR32P1Q8NGA4 272 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 ITPKCQ96DU7 683 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 SLC25A21Q9BQT8 299 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 LRRC61Q9BV99 259 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 ACTR3CQ9C0K3 210 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 RAB19A4D1S5 217 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 TCAPO15273 167 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 RAB35Q15286 201 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 Q6ZS52 159 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 ARIH2OSQ8N7S6 290 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 WSB2Q9NYS7 404 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 R4GMQ9 66 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 ARL2-SNX15V9GYD0 113 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 TXNDC12O95881 172 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 EGR3Q06889 387 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 PRR27Q6MZM9 219 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 RHOUQ7L0Q8 258 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 NANOGP1Q8N7R0 232 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 OR10R2Q8NGX6 335 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 BCL7CQ8WUZ0 217 aaPredicted RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 MKRN2Q9H000 416 aaKnown RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 STRAPQ9Y3F4 350 aaKnown RBP12□□□□□ -0.49
COL1A1-201ENST00000225964 TMPRSS11DO60235 418 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 H2AFB1P0C5Y9 115 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 SPRED3Q2MJR0 410 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 TMEM268Q5VZI3 342 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 PKMYT1Q99640 499 aa12□□□□□ -0.49
COL1A1-201ENST00000225964 A0A1W2PR80 420 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 MAGEB4O15481 346 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-201ENST00000225964 MT-ND4LP03901 98 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 CTSLP07711 333 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 PIGAP37287 484 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 STUMQ69YW2 141 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 NOXO1Q8NFA2 376 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 OR10V1Q8NGI7 309 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 ADAT1Q9BUB4 502 aaKnown RBP11.99□□□□□ -0.49
COL1A1-201ENST00000225964 RBFOX1Q9NWB1 397 aaKnown RBP11.99□□□□□ -0.49
COL1A1-201ENST00000225964 CLEC5AQ9NY25 188 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 DBX1A6NMT0 343 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 SHISA8B8ZZ34 492 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 SBK2P0C263 348 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 S100A11P31949 105 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 CELF2-AS1Q8N7Q2 184 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 DTWD2Q8NBA8 298 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 ERGIC1Q969X5 290 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 GALMQ96C23 342 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 ACY3Q96HD9 319 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 GDF2Q9UK05 429 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-201ENST00000225964 ANKRD12Q6UB98 2062 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 ST8SIA3O43173 380 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF90Q03938 601 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 GUSBP11Q6P575 273 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 ANKUB1A6NFN9 424 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 FGF7P21781 194 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 AGBL4Q5VU57 503 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 LRFN3Q9BTN0 628 aa11.99□□□□□ -0.49
COL1A1-201ENST00000225964 ZNF71Q9NQZ8 489 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-201ENST00000225964 SSC5DA1L4H1 1573 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms