RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 THBS2P35442 1172 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 EVX1P49640 407 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 PRKXP51817 358 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 ZNF121P58317 390 aaPredicted RBP12.11□□□□□ -0.47
TPM1-215ENST00000558868 RGS21Q2M5E4 152 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 INO80CQ6PI98 192 aaPredicted RBP12.11□□□□□ -0.47
TPM1-215ENST00000558868 ZNF813Q6ZN06 617 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 ZNF627Q7L945 461 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 LINGO2Q7L985 606 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 SLC16A14Q7RTX9 510 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 DPPA2Q7Z7J5 298 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 LRRTM1Q86UE6 522 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 LRRC28Q86X40 367 aaPredicted RBP12.11□□□□□ -0.47
TPM1-215ENST00000558868 GDPD1Q8N9F7 314 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 OR10AC1Q8NH08 325 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 ZNF671Q8TAW3 534 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 TRMT10AQ8TBZ6 339 aaKnown RBP12.11□□□□□ -0.47
TPM1-215ENST00000558868 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 ZNF837Q96EG3 531 aaPredicted RBP12.11□□□□□ -0.47
TPM1-215ENST00000558868 SLC25A18Q9H1K4 315 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 BRD7Q9NPI1 651 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 CLCF1Q9UBD9 225 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 RABL2AQ9UBK7 228 aaPredicted RBP12.11□□□□□ -0.47
TPM1-215ENST00000558868 CLEC4AQ9UMR7 237 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 RABL2BQ9UNT1 228 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 SLC5A6Q9Y289 635 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 DSPP15924 2871 aaKnown RBP12.11□□□□□ -0.47
TPM1-215ENST00000558868 A0A087WV48 116 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 IFITM5A6NNB3 132 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 P2RY10O00398 339 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 SS18L1O75177 396 aaPredicted RBP12.1□□□□□ -0.47
TPM1-215ENST00000558868 ACSM4P0C7M7 580 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 CALCBP10092 127 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 B4GALT1P15291 398 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 AGTR1P30556 359 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 MAGEB1P43366 347 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 TPTEP56180 551 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 SCAND1P57086 179 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 TMPRSS3P57727 454 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 SLC25A35Q3KQZ1 300 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 SLC36A2Q495M3 483 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 OR2A2Q6IF42 318 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 DOK3Q7L591 496 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 BTLAQ7Z6A9 289 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 FGD2Q7Z6J4 655 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 UBE2J2Q8N2K1 259 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 RBMXL3Q8N7X1 1067 aaKnown RBP12.1□□□□□ -0.47
TPM1-215ENST00000558868 MINDY2Q8NBR6 621 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 OR51A4Q8NGJ6 313 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 OR1F12Q8NHA8 337 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 HTRA1Q92743 480 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 WNT2BQ93097 391 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 PPP1R14AQ96A00 147 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 PGAM5Q96HS1 289 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 SH3GL3Q99963 347 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 ATPIF1Q9UII2 106 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 SPATA2Q9UM82 520 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 V9GYH0 126 aa12.1□□□□□ -0.47
TPM1-215ENST00000558868 A0A0U1RQV5 110 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 OR6C6A6NF89 314 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 C1QTNF9BB2RNN3 333 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 M0R135 149 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 DOK2O60496 412 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 TGM6O95932 706 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 APOA1P02647 267 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 C1QTNF9P0C862 333 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 SLC2A2P11168 524 aaPredicted RBP12.09□□□□□ -0.47
TPM1-215ENST00000558868 ZNF32P17041 273 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 ATF1P18846 271 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 CFPP27918 469 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 OTX1P32242 354 aaPredicted RBP12.09□□□□□ -0.47
TPM1-215ENST00000558868 OR3A2P47893 321 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 DEFA1P59665 94 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 DEFA3P59666 94 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 ARF1P84077 181 aaKnown RBP12.09□□□□□ -0.47
TPM1-215ENST00000558868 GALK2Q01415 458 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 TBR1Q16650 682 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 GLT8D1Q68CQ7 371 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 CNIH2Q6PI25 160 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 DRAM2Q6UX65 266 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 BAIAP2L2Q6UXY1 529 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 FAM57BQ71RH2 274 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 NUFIP2Q7Z417 695 aaKnown RBP12.09□□□□□ -0.47
TPM1-215ENST00000558868 SERPINA12Q8IW75 414 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 SAMD12Q8N8I0 201 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 OR52H1Q8NGJ2 320 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 FOXRED1Q96CU9 486 aaPredicted RBP12.09□□□□□ -0.47
TPM1-215ENST00000558868 ZNF799Q96GE5 643 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 TAAR6Q96RI8 345 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 TRIB1Q96RU8 372 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 OR2H1Q9GZK4 316 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 ABCB10Q9NRK6 738 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 ZNF275Q9NSD4 429 aaPredicted RBP12.09□□□□□ -0.47
TPM1-215ENST00000558868 ETV7Q9Y603 341 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 CACNA1CQ13936 2221 aa12.09□□□□□ -0.47
TPM1-215ENST00000558868 ITPR1Q14643 2758 aa12.08□□□□□ -0.48
TPM1-215ENST00000558868 TRAV8-7A0A075B6U6 113 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms