RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SYT14Q8NB59 555 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 RELL2Q8NC24 303 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-213ENST00000550629 SLC37A3Q8NCC5 494 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 STEAP2Q8NFT2 490 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 OR4K13Q8NH42 304 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 RHOXF1Q8NHV9 184 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 FAM81AQ8TBF8 368 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 CYGBQ8WWM9 190 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 ITLN2Q8WWU7 325 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-213ENST00000550629 HDAC2Q92769 488 aaKnown RBP5.01□□□□□ -1.61
SCAF11-213ENST00000550629 MCHR2Q969V1 340 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 Q96MT0 163 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 NMNAT3Q96T66 252 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 ANKRD60Q9BZ19 345 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 OPN3Q9H1Y3 402 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-213ENST00000550629 SYT4Q9H2B2 425 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 Q9H521 79 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 SIAEQ9HAT2 523 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 TVP23BQ9NYZ1 205 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 KCNG2Q9UJ96 466 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 RALYQ9UKM9 306 aaKnown RBP5.01□□□□□ -1.61
SCAF11-213ENST00000550629 RAB26Q9ULW5 256 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 GPR52Q9Y2T5 361 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 UGT2A1Q9Y4X1 527 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 DNAJC13O75165 2243 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 MED12Q93074 2177 aa5.01□□□□□ -1.61
SCAF11-213ENST00000550629 GCN1Q92616 2671 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 LRRK2Q5S007 2527 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 FREM3P0C091 2139 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 HELZ2Q9BYK8 2649 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 USP9XQ93008 2570 aaPredicted RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 ARPC4-TTLL3A0A0A6YYG9 625 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 C16orf97H3BN30 126 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 TLX2O43763 284 aaPredicted RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 PRKYO43930 277 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 SLC16A7O60669 478 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 ZG16O60844 167 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 GLCEO94923 617 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 FARS2O95363 451 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 ITGA5P08648 1049 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 NPSP0C0P6 89 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 OR8G3PP0DMU2 310 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 CTLA4P16410 223 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 SPI1P17947 270 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 MSR1P21757 451 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 SLC2A5P22732 501 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 IGHV1-2P23083 117 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 MYF6P23409 242 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 EDNRAP25101 427 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 LAP3P28838 519 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 HTR1FP30939 366 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 UGT2B10P36537 528 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 TPTEP56180 551 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 PCBD1P61457 104 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 LSM6P62312 80 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 CSNK2BP67870 215 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 ARF1P84077 181 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 RAB32Q13637 225 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 GGTLC2Q14390 218 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 CNN3Q15417 329 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 GABRA6Q16445 453 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 CEACAM16Q2WEN9 425 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 TEX30Q5JUR7 227 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 LCN1P1Q5VSP4 162 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 FAM27BQ5VT28 67 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF691Q5VV52 312 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 PLBD1Q6P4A8 553 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 STAC2Q6ZMT1 411 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 LINGO2Q7L985 606 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 CPOQ8IVL8 374 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 IZUMO1Q8IYV9 350 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 C8orf59Q8N0T1 100 aaPredicted RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 OR6V1Q8N148 313 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF433Q8N7K0 673 aaPredicted RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 TCEANCQ8N8B7 351 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 CYB561A3Q8NBI2 242 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 SDR9C7Q8NEX9 313 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 PROKR2Q8NFJ6 384 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 SLC26A10Q8NG04 563 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 TMEM171Q8WVE6 324 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 HSD17B8Q92506 261 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 RNASE6Q93091 150 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 PTP4A1Q93096 173 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 MUS81Q96NY9 551 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 ALKBH3Q96Q83 286 aaPredicted RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 IL4I1Q96RQ9 567 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 RBM24Q9BX46 236 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 NUAK2Q9H093 628 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 MARCH7Q9H992 704 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 RPRD1BQ9NQG5 326 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 TMEM38BQ9NVV0 291 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 CLN6Q9NWW5 311 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 HAO2Q9NYQ3 351 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 RNF7Q9UBF6 113 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 WARS2Q9UGM6 360 aaKnown RBP5□□□□□ -1.61
SCAF11-213ENST00000550629 FBXL3Q9UKT7 428 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5□□□□□ -1.61
SCAF11-213ENST00000550629 B9D1Q9UPM9 204 aa5□□□□□ -1.61
SCAF11-213ENST00000550629 KLF2Q9Y5W3 355 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms