RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 BLOC1S1P78537 153 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 DEFA6Q01524 100 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 LTBQ06643 244 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 OR2F1Q13607 317 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 SMCO1Q147U7 214 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 PLEKHN1Q494U1 663 aaPredicted RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 GLT8D1Q68CQ7 371 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 RAB12Q6IQ22 244 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 SLC48A1Q6P1K1 146 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 FBXO42Q6P3S6 717 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 TMPRSS11FQ6ZWK6 438 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 ZNF383Q8NA42 475 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 SDR9C7Q8NEX9 313 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 FAM131CQ96AQ9 280 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 C8orf44Q96CB5 159 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 MRGPRX1Q96LB2 322 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 MENTQ9BUN1 341 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 CST11Q9H112 138 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 KLHL31Q9H511 634 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 SYNPO2LQ9H987 977 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 EPHA6Q9UF33 1036 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 PCDHB10Q9UN67 800 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 SRPK3Q9UPE1 567 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 HEATR5BQ9P2D3 2071 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 hCG_1809904A0A1W2PP81 198 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 A0A1W2PR64 198 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 A0A1W2PRV1 198 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 GXYLT2A0PJZ3 443 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 PRR19A6NJB7 356 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 AGPAT2O15120 278 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 PMP2P02689 132 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 SRFP11831 508 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 S1PR1P21453 382 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 BDKRB2P30411 391 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 DLSTP36957 453 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 MRPL49Q13405 166 aaKnown RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 ZNF345Q14585 488 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 OR7A5Q15622 319 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 EIF2S3LQ2VIR3 472 aaKnown RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 ABCA11PQ4W5N1 156 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 MFSD12Q6NUT3 480 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 H3F3CQ6NXT2 135 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 JMJD6Q6NYC1 403 aaPredicted RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 RABEPKQ7Z6M1 372 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 TMPRSS12Q86WS5 348 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 DND1Q8IYX4 353 aaKnown RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 SLC16A11Q8NCK7 471 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 STEAP2Q8NFT2 490 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 OR51S1Q8NGJ8 323 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 FAM122AQ96E09 287 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 THOC3Q96J01 351 aaKnown RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 TMEM68Q96MH6 324 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 EDEM2Q9BV94 578 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 AICDAQ9GZX7 198 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 RIMS4Q9H426 269 aaPredicted RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 THAP10Q9P2Z0 257 aaPredicted RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 ZNF629Q9UEG4 869 aaPredicted RBP4.73□□□□□ -1.65
PROM1-220ENST00000540805 WASF3Q9UPY6 502 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 USF3Q68DE3 2245 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 NAV3Q8IVL0 2385 aa4.73□□□□□ -1.65
PROM1-220ENST00000540805 IGHV3-64DA0A0J9YX35 117 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 MEIS3P1A6NDR6 274 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 C5orf51A6NDU8 294 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 TVP23AA6NH52 213 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 GATCO43716 136 aaKnown RBP4.72□□□□□ -1.65
PROM1-220ENST00000540805 PMS2P2O95744 297 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 THBS1P07996 1170 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 TMIGD3P0DMS9 266 aaPredicted RBP4.72□□□□□ -1.65
PROM1-220ENST00000540805 LIPCP11150 499 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 TMEM176BQ3YBM2 270 aaPredicted RBP4.72□□□□□ -1.65
PROM1-220ENST00000540805 ALG10Q5BKT4 473 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 TMEM196Q5HYL7 178 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 PYY3Q5JQD4 70 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 MRM1Q6IN84 353 aaKnown RBP4.72□□□□□ -1.65
PROM1-220ENST00000540805 UNQ6126/PRO20091Q6UXV3 157 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 STAC2Q6ZMT1 411 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 DPPA2Q7Z7J5 298 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 ZNF227Q86WZ6 799 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 PRR18Q8N4B5 295 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 OR52R1Q8NGF1 315 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 OR5K2Q8NHB8 316 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 CASTOR1Q8WTX7 329 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 FAM71F1Q96KD3 344 aaPredicted RBP4.72□□□□□ -1.65
PROM1-220ENST00000540805 GGACTQ9BVM4 153 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 TBC1D29Q9UFV1 150 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 MMP17Q9ULZ9 603 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 ICAM5Q9UMF0 924 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 ZNF337Q9Y3M9 751 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 MYO7BQ6PIF6 2116 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 A0A087WV48 116 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 CENPVL1A0A0U1RR11 272 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 A0A1W2PPV9 198 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 GGT3PA6NGU5 568 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 ARGFXA6NJG6 315 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 C4orf51C9J302 202 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 XRCC3O43542 346 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 ZFAND5O76080 213 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 OR8U8P0C7N1 319 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 SFTPCP11686 197 aa4.72□□□□□ -1.65
PROM1-220ENST00000540805 CD27P26842 260 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms