RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 ZNF878C9JN71 531 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 H0YHG0 523 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 H7C417 338 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 M0R135 149 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ENTPD6O75354 484 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 CLIC3O95833 236 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 LCATP04180 440 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 LYNP07948 512 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 NAT2P11245 290 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ZNF250P15622 560 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 GCH1P30793 250 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 SLC6A9P48067 706 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 KLF3P57682 345 aaPredicted RBP10.98□□□□□ -0.65
VEGFA-224ENST00000523873 SLC34A1Q06495 639 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ECH1Q13011 328 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 HLXQ14774 488 aaPredicted RBP10.98□□□□□ -0.65
VEGFA-224ENST00000523873 SNAI3Q3KNW1 292 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ZNF718Q3SXZ3 478 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ARL9Q6T311 187 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 LRRN1Q6UXK5 716 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 GID4Q8IVV7 300 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ENTHD1Q8IYW4 607 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ZNF283Q8N7M2 679 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 OR51G2Q8NGK0 314 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 RNF133Q8WVZ7 376 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 NRG4Q8WWG1 115 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ZNF799Q96GE5 643 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 CNN2Q99439 309 aaKnown RBP10.98□□□□□ -0.65
VEGFA-224ENST00000523873 KCNJ15Q99712 375 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 RNPEPL1Q9HAU8 725 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 ADGRL4Q9HBW9 690 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 LAMP5Q9UJQ1 280 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 PMF1-BGLAPU3KQ54 211 aa10.98□□□□□ -0.65
VEGFA-224ENST00000523873 SLC22A31A6NKX4 558 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 M0R233 179 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 MAGEB4O15481 346 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-224ENST00000523873 SSX4O60224 188 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 GABRB1P18505 474 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 ALOX5APP20292 161 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 HTR1FP30939 366 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 OPRL1P41146 370 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 CX3CR1P49238 355 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 PPOXP50336 477 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 TPTEP56180 551 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 GGTLC2Q14390 218 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 NKPD1Q17RQ9 610 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 MBNL2Q5VZF2 373 aaKnown RBP10.97□□□□□ -0.65
VEGFA-224ENST00000523873 SLC35F2Q8IXU6 374 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 ZNF555Q8NEP9 628 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 CYGBQ8WWM9 190 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 SPTSSAQ969W0 71 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 APOBEC3DQ96AK3 386 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-224ENST00000523873 CMBLQ96DG6 245 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 Q96MF0 132 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 TBX5Q99593 518 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 C1QTNF5Q9BXJ0 243 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 YIPF3Q9GZM5 350 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 BRD7Q9NPI1 651 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 SLCO1C1Q9NYB5 712 aa10.97□□□□□ -0.65
VEGFA-224ENST00000523873 WARS2Q9UGM6 360 aaKnown RBP10.97□□□□□ -0.65
VEGFA-224ENST00000523873 SLC16A6O15403 523 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 IGHV3-13P01766 116 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 H2BFMP0C1H6 154 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 SBK2P0C263 348 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 BMP4P12644 408 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 HSD11B1P28845 292 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 OTX1P32242 354 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-224ENST00000523873 EVX1P49640 407 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 RGS6P49758 472 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 NUDT6P53370 316 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 SNRPGP62308 76 aaKnown RBP10.96□□□□□ -0.65
VEGFA-224ENST00000523873 PSG7Q13046 419 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 UNQ6126/PRO20091Q6UXV3 157 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 COLCA1Q6ZS62 124 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 SSX6Q7RTT6 188 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 OR5AS1Q8N127 324 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 PACRGLQ8N7B6 248 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 ZNF454Q8N9F8 522 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 OR2AE1Q8NHA4 323 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 APH1BQ8WW43 257 aa10.96□□□□□ -0.65
VEGFA-224ENST00000523873 TRUB1Q8WWH5 349 aaKnown RBP10.96□□□□□ -0.65
VEGFA-224ENST00000523873 PURGQ9UJV8 347 aaKnown RBP10.96□□□□□ -0.65
VEGFA-224ENST00000523873 TACC2O95359 2948 aa10.96□□□□□ -0.66
VEGFA-224ENST00000523873 TRIM64A6NGJ6 449 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 TRIM64BA6NI03 449 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 ZSCAN5BA6NJL1 495 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 TBX1O43435 398 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 TIMM8AO60220 97 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-224ENST00000523873 ANXA2P07355 339 aaKnown RBP10.95□□□□□ -0.66
VEGFA-224ENST00000523873 MAGEB1P43366 347 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 EFNA4P52798 201 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 ZNF121P58317 390 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-224ENST00000523873 SELENOVP59797 346 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 CXCR4P61073 352 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 GRB2P62993 217 aaKnown RBP10.95□□□□□ -0.66
VEGFA-224ENST00000523873 IL5RAQ01344 420 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 OCLNQ16625 522 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 CLEC12BQ2HXU8 276 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 GLYATL3Q5SZD4 288 aa10.95□□□□□ -0.66
VEGFA-224ENST00000523873 SHEQ5VZ18 495 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms