RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 RAB3BP20337 219 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 MDKP21741 143 aaPredicted RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 WARSP23381 471 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 HTR2CP28335 458 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 PFN2P35080 140 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 MAS1LP35410 378 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ANP32AP39687 249 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ATP5J2P56134 94 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 TAS2R60P59551 318 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 PRPS1P60891 318 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 SLC35B1P78383 322 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 SYCP1Q15431 976 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ATP6V1FQ16864 119 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 RFX4Q33E94 735 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 CCDC14Q49A88 953 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ZBED5Q49AG3 693 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 PTPN20Q4JDL3 420 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 TMEM255AQ5JRV8 349 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 THEM4Q5T1C6 240 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 C6orf183Q5T699 404 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 LCN12Q6JVE5 192 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 C6orf89Q6UWU4 347 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF621Q6ZSS3 439 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 COX15Q7KZN9 410 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ABHD13Q7L211 337 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 CAMK2N1Q7Z7J9 78 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 OAFQ86UD1 273 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ERO1BQ86YB8 467 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 KRTAP11-1Q8IUC1 163 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 C17orf78Q8N4C9 275 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 KIF2BQ8N4N8 673 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 MREGQ8N565 214 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 Q8N9L7 120 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 NPBQ8NG41 125 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 OR52E2Q8NGJ4 325 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 OR4S2Q8NH73 311 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 CLHC1Q8NHS4 586 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 FANK1Q8TC84 345 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 LGALS14Q8TCE9 139 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 MCOLN3Q8TDD5 553 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 BLOC1S5Q8TDH9 187 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 PDCD6IPQ8WUM4 868 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 GEMIN6Q8WXD5 167 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 NDRG1Q92597 394 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 MRGPRFQ96AM1 343 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 FAM3DQ96BQ1 224 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 CCDC124Q96CT7 223 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 LRRC58Q96CX6 371 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 RCN3Q96D15 328 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 STARD4Q96DR4 205 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 FAM210BQ96KR6 192 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 BTN2A3PQ96KV6 586 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 FAM210AQ96ND0 272 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 TRNT1Q96Q11 434 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 GABARAPL3Q9BY60 117 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ULBP2Q9BZM5 246 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ANKHQ9HCJ1 492 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 VCX3AQ9NNX9 186 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 TMEM9BQ9NQ34 198 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 MTRF1LQ9UGC7 380 aaKnown RBP1.61□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF229Q9UJW7 825 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 GGA2Q9UJY4 613 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 V9GYY9 64 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 THSD7BQ9C0I4 1608 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 LRRK1Q38SD2 2015 aa1.61□□□□□ -2.15
LMNB1-207ENST00000494185 FHOD3Q2V2M9 1422 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 IGHV3OR16-9A0A0B4J2B5 98 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 RNASEK-C17orf49H0YIS7 233 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 GABRPO00591 440 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 NPIPB7O75200 414 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ALOX12BO75342 701 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 TRAPPC6AO75865 159 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 FADS2O95864 444 aaKnown RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 CST4P01036 141 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 RPN2P04844 631 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 RHOCP08134 193 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR8U9P0C7N5 309 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 PGA5P0DJD9 388 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR5H8P0DN80 308 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ERGP11308 486 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 IGFBP3P17936 291 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 GGT1P19440 569 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 CSNK2A2P19784 350 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 USF1P22415 310 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 IL32P24001 234 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 HTR1EP28566 365 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ARR3P36575 388 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 DNASE1L1P49184 302 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 RND2P52198 227 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 AP1S2P56377 157 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 NUP107P57740 925 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR2B8PP59922 312 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 LRRC63Q05C16 580 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 KDSRQ06136 332 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 TCP10Q12799 353 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ART3Q13508 389 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 PON3Q15166 354 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 TTLL9Q3SXZ7 439 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 CPTPQ5TA50 214 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 FRMPD2BQ6IN97 320 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms