RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 BIDP55957 195 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 BST1Q10588 318 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 KLHL40Q2TBA0 621 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 GPRC6AQ5T6X5 926 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 ZYG11AQ6WRX3 759 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 MOB1BQ7L9L4 216 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 TRPM8Q7Z2W7 1104 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 NECAB1Q8N987 351 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 OR2Y1Q8NGV0 311 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 OR56B4Q8NH76 319 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 FAM110BQ8TC76 370 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 NAP1L5Q96NT1 182 aaPredicted RBP3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 RNF2Q99496 336 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 GAL3ST1Q99999 423 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 ANGPTL4Q9BY76 406 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 DEFB126Q9BYW3 111 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 ZNF275Q9NSD4 429 aaPredicted RBP3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 NUDT15Q9NV35 164 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 ETNK2Q9NVF9 386 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 BFARQ9NZS9 450 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 Q9UF83 564 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 MTRF1LQ9UGC7 380 aaKnown RBP3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 ZNF107Q9UII5 783 aaPredicted RBP3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 COPS3Q9UNS2 423 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 U3KQK5 164 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 HUWE1Q7Z6Z7 4374 aaKnown RBP3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 FAT4Q6V0I7 4981 aa3.58□□□□□ -1.84
SSX2IP-208ENST00000490476 FAM240BA0A1B0GVZ2 78 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 XKRY2A2RUG3 117 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 GOLGA8SH3BPF8 625 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 RAMP3O60896 148 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 CIB2O75838 187 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 OXSR1O95747 527 aaPredicted RBP3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 MX1P20591 662 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 WARSP23381 471 aaKnown RBP3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 HTR1FP30939 366 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 NTSP30990 170 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 MAP3K8P41279 467 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 ACTR1BP42025 376 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 CHRNB3Q05901 458 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 TRDNQ13061 729 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 PIGHQ14442 188 aaPredicted RBP3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 AANATQ16613 207 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 KLHL38Q2WGJ6 581 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 OR2B11Q5JQS5 317 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 ZNF774Q6NX45 483 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 ARCQ7LC44 396 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 OR10H4Q8NGA5 316 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 OR13F1Q8NGS4 319 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 KIFAP3Q92845 792 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 UBE2E3Q969T4 207 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 ANKRD9Q96BM1 317 aaPredicted RBP3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 CXorf40BQ96DE9 158 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 SMARCD1Q96GM5 515 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 TPD52L3Q96J77 140 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 FOXN4Q96NZ1 517 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 FMO2Q99518 471 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 MAPKAP1Q9BPZ7 522 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 ZNF670Q9BS34 389 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 RNF126Q9BV68 326 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 TRIM62Q9BVG3 475 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 RSPO3Q9BXY4 272 aaPredicted RBP3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 PARD6BQ9BYG5 372 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 RAB34Q9BZG1 259 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 Q9H3A6 140 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 RBKSQ9H477 322 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 ASB7Q9H672 318 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 METTL17Q9H7H0 456 aaPredicted RBP3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 PTGES2Q9H7Z7 377 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 YY1AP1Q9H869 796 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 ISG20L2Q9H9L3 353 aaKnown RBP3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 NHEJ1Q9H9Q4 299 aaPredicted RBP3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 NECAP2Q9NVZ3 263 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 NMRK1Q9NWW6 199 aa3.57□□□□□ -1.84
SSX2IP-208ENST00000490476 SCN3AQ9NY46 2000 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 IGKV3D-20A0A0C4DH25 116 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 IQANK1A0A1B0GTG1 560 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 TCRBV9S1A1TA0A576 114 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 OR52A4PA6NMU1 304 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 GABRR3A8MPY1 467 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 A8MXQ7 604 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 BCL2L11O43521 198 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 LALBAP00709 142 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 IGLL1P15814 213 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 GCFC2P16383 781 aaKnown RBP3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 ATP6V1B2P21281 511 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 SSR1P43307 286 aaKnown RBP3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 KIR2DS2P43631 304 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 P2RY4P51582 365 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 CCR8P51685 355 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 CDH4P55283 916 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 ATP5IP56385 69 aaPredicted RBP3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 DSCR10P59022 87 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 RPL23AP62750 156 aaKnown RBP3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 RPS24P62847 133 aaKnown RBP3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 SLC1A5Q15758 541 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 SLC25A30Q5SVS4 291 aa3.56□□□□□ -1.84
SSX2IP-208ENST00000490476 PRAMEF5Q5TYX0 476 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms