RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 GSKIPQ9P0R6 139 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 B9D1Q9UPM9 204 aa12.34□□□□□ -0.43
NPHP4-207ENST00000470763 NPIPB9F8W1W9 429 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 ATXN8OSP0DMR3 200 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 RAB6AP20340 208 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
NPHP4-207ENST00000470763 RAB32Q13637 225 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 PYY3Q5JQD4 70 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 OR4D6Q8NGJ1 314 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 ASB5Q8WWX0 329 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 LCN9Q8WX39 176 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 TSPAN32Q96QS1 320 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 NRSN2Q9GZP1 204 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 RGCCQ9H4X1 137 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 SLC2A8Q9NY64 477 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 AMDHD2Q9Y303 409 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 A0A087WV62 115 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 HRKO00198 91 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 PHYHO14832 338 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 GMFGO60234 142 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 LMX1BO60663 402 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 MOSPD3O75425 235 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 NKX2-2O95096 273 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 CEBPBP17676 345 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 CFPP27918 469 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 HTR5AP47898 357 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 CSNK1EP49674 416 aaKnown RBP12.33□□□□□ -0.44
NPHP4-207ENST00000470763 EGR3Q06889 387 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 TDGQ13569 410 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 BTNL8Q6UX41 500 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 ZNF550Q7Z398 422 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 AKR7LQ8NHP1 331 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 ASB17Q8WXJ9 295 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 RAB33BQ9H082 229 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 SLC2A4RGQ9NR83 387 aa12.33□□□□□ -0.44
NPHP4-207ENST00000470763 TRIOO75962 3097 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 GNB3P16520 340 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 CX3CR1P49238 355 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ADPRHP54922 357 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 SSTP61278 116 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 RPS15AP62244 130 aaKnown RBP12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ISXQ2M1V0 245 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ZNF615Q8N8J6 731 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 OR4C3Q8NH37 302 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 CYYR1Q96J86 154 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 LRRC3BQ96PB8 259 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ZNF587Q96SQ5 575 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-207ENST00000470763 LPAR4Q99677 370 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 SLC5A7Q9GZV3 580 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 SPACA1Q9HBV2 294 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-207ENST00000470763 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 COLEC10Q9Y6Z7 277 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 GPR75O95800 540 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ADH5P11766 374 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 SLC6A9P48067 706 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 NPY4RP50391 375 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ENPP2Q13822 863 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 TOMM20Q15388 145 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 Q3ZCU0 254 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 PRSS54Q6PEW0 395 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 TTLL10Q6ZVT0 673 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ZNF383Q8NA42 475 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 OR10C1Q96KK4 312 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 GPX7Q96SL4 187 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-207ENST00000470763 SMIM3Q9BZL3 60 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 PDE7BQ9NP56 450 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 TREM2Q9NZC2 230 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 EDDM13A0A1B0GTR0 161 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 RHPN2P1A8MT19 583 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 SPARCP09486 303 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 TFF2Q03403 129 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 SLC17A1Q14916 467 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 MARCH3Q86UD3 253 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 OTOSQ8NHW6 89 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 RAB3CQ96E17 227 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 SPACA7Q96KW9 195 aa12.32□□□□□ -0.44
NPHP4-207ENST00000470763 OR10H2O60403 315 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 DNASE1L1P49184 302 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 CYCSP99999 105 aaKnown RBP12.31□□□□□ -0.44
NPHP4-207ENST00000470763 ZNF74Q16587 644 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 ZNF260Q3ZCT1 412 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
NPHP4-207ENST00000470763 LRRC75AQ8NAA5 344 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 OR2I1PQ8NGU4 316 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 SLC25A43Q8WUT9 341 aaPredicted RBP12.31□□□□□ -0.44
NPHP4-207ENST00000470763 AQP3Q92482 292 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 SLAMF9Q96A28 289 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 SGK3Q96BR1 496 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 MARS2Q96GW9 593 aaKnown RBP12.31□□□□□ -0.44
NPHP4-207ENST00000470763 OR8B4Q96RC9 309 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 METTL8Q9H825 291 aaKnown RBP12.31□□□□□ -0.44
NPHP4-207ENST00000470763 HIF3AQ9Y2N7 669 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 C11orf98E9PRG8 122 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 RAB27BO00194 218 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 EML2O95834 649 aa12.31□□□□□ -0.44
NPHP4-207ENST00000470763 IFNA2P01563 188 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms