RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ZNF799Q96GE5 643 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 CENPNQ96H22 339 aaPredicted RBP11□□□□□ -0.65
COL5A1-206ENST00000465877 PLEKHA8Q96JA3 519 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 INTS14Q96SY0 518 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 PRRG3Q9BZD7 231 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 TUBG2Q9NRH3 451 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 CYSLTR2Q9NS75 346 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 PTTG3PQ9NZH4 202 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 PURGQ9UJV8 347 aaKnown RBP11□□□□□ -0.65
COL5A1-206ENST00000465877 STARD10Q9Y365 291 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 NAV3Q8IVL0 2385 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 HIVEP2P31629 2446 aa11□□□□□ -0.65
COL5A1-206ENST00000465877 CUBNO60494 3623 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 IGHV4-61A0A0C4DH41 118 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 SAC3D1A6NKF1 404 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 F5H5K5 113 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 H3BNX3 289 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 MITFO75030 526 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 IGHV1-46P01743 117 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 KITLGP21583 273 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 USF1P22415 310 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 SLC2A5P22732 501 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 GSTT1P30711 240 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 SLC6A9P48067 706 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 RIPPLY3P57055 190 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 CCL8P80075 99 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 RIN1Q13671 783 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 PTGES3Q15185 160 aaKnown RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 TSTQ16762 297 aaKnown RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 TMEM249Q2WGJ8 235 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 KLHL12Q53G59 568 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 TEX30Q5JUR7 227 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 FAM209AQ5JX71 171 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 ZFP1Q6P2D0 407 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 CXXC5Q7LFL8 322 aaKnown RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 DPY19L4Q7Z388 723 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 CPOQ8IVL8 374 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 ZNF540Q8NDQ6 660 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 BBS1Q8NFJ9 593 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 ST7LQ8TDW4 575 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 RDH5Q92781 318 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 YIPF5Q969M3 257 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 SPTSSAQ969W0 71 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 SLAMF6Q96DU3 332 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 ZMYND19Q96E35 227 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 RAB3IPQ96QF0 476 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 CIB1Q99828 191 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 COPS4Q9BT78 406 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 C1QTNF5Q9BXJ0 243 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 OR51V1Q9H2C8 321 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 MARCH7Q9H992 704 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 CHODLQ9H9P2 273 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 SAP30LQ9HAJ7 183 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 NKIRAS2Q9NYR9 191 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 TVP23BQ9NYZ1 205 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 ENOPH1Q9UHY7 261 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 TMEFF2Q9UIK5 374 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-206ENST00000465877 DYSFO75923 2080 aa10.99□□□□□ -0.65
COL5A1-206ENST00000465877 M0R129 80 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 ZNF593O00488 134 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 TPD52L2O43399 206 aaKnown RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 SPRY3O43610 288 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 SELENOFO60613 162 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 RP2O75695 350 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 ZNF16P17020 682 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 EPHA2P29317 976 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 OTX1P32242 354 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 LIPAP38571 399 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 TPTEP56180 551 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 RPS7P62081 194 aaKnown RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 MRPS11P82912 194 aaKnown RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 PPP2R2BQ00005 443 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 EIF2B1Q14232 305 aaKnown RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 HLXQ14774 488 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 SNAPC1Q16533 368 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 RSPO1Q2MKA7 263 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 SLC35D3Q5M8T2 416 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 FBXW12Q6X9E4 464 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 COLCA1Q6ZS62 124 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 TIGD4Q8IY51 512 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 OR5L1Q8NGL2 311 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 PTP4A1Q93096 173 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 CMBLQ96DG6 245 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 PKP2Q99959 881 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 MSL2Q9HCI7 577 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 ZNF275Q9NSD4 429 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 DECR2Q9NUI1 292 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 MALRD1Q5VYJ5 2156 aa10.98□□□□□ -0.65
COL5A1-206ENST00000465877 SONP18583 2426 aaKnown RBP10.98□□□□□ -0.65
COL5A1-206ENST00000465877 IGHV1-69-2A0A0G2JMI3 117 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 ZAR1LA6NP61 321 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 CD5LO43866 347 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 PRKYO43930 277 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 CDC14BO60729 498 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 LCATP04180 440 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 ADH4P08319 380 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 RAC2P15153 192 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 ANOS1P23352 680 aa10.97□□□□□ -0.65
COL5A1-206ENST00000465877 NAA10P41227 235 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms