RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 C11orf65Q8NCR3 313 aa9.74□□□□□ -0.85
HCFC1-204ENST00000461098 BHLHE23Q8NDY6 225 aa9.74□□□□□ -0.85
HCFC1-204ENST00000461098 RASD2Q96D21 266 aa9.74□□□□□ -0.85
HCFC1-204ENST00000461098 TOR3AQ9H497 397 aa9.74□□□□□ -0.85
HCFC1-204ENST00000461098 KCNK9Q9NPC2 374 aa9.74□□□□□ -0.85
HCFC1-204ENST00000461098 CCDC167Q9P0B6 97 aa9.74□□□□□ -0.85
HCFC1-204ENST00000461098 ERVK-18Q9QC07 812 aa9.74□□□□□ -0.85
HCFC1-204ENST00000461098 BIRC6Q9NR09 4857 aa9.74□□□□□ -0.85
HCFC1-204ENST00000461098 OR10H3O60404 316 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 TNFRSF1BP20333 461 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 FPR3P25089 353 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 GUCA1AP43080 201 aaPredicted RBP9.73□□□□□ -0.85
HCFC1-204ENST00000461098 PRSS12P56730 875 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 CTXN1P60606 82 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 PIN1Q13526 163 aaPredicted RBP9.73□□□□□ -0.85
HCFC1-204ENST00000461098 INTS11Q5TA45 600 aaKnown RBP9.73□□□□□ -0.85
HCFC1-204ENST00000461098 PRAMEF6Q5VXH4 476 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 COLCA1Q6ZS62 124 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 C1orf122Q6ZSJ8 110 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 Q6ZTK2 550 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 BTN2A1Q7KYR7 527 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 VMO1Q7Z5L0 202 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 FGFRL1Q8N441 504 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 GALNT4Q8N4A0 578 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 OR1F12Q8NHA8 337 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 ERGIC1Q969X5 290 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 PHF21AQ96BD5 680 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 ZBTB9Q96C00 473 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 ECSITQ9BQ95 431 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 MMADHCQ9H3L0 296 aaPredicted RBP9.73□□□□□ -0.85
HCFC1-204ENST00000461098 WDR76Q9H967 626 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 TMEM100Q9NV29 134 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 RIMS3Q9UJD0 308 aa9.73□□□□□ -0.85
HCFC1-204ENST00000461098 RNASEK-C17orf49H0YIS7 233 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 RER1O15258 196 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 ADAM20O43506 726 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 SHOX2O60902 331 aaPredicted RBP9.72□□□□□ -0.85
HCFC1-204ENST00000461098 IRF2P14316 349 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 CD200P41217 278 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 RGS6P49758 472 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 GZMMP51124 257 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 DLX1P56177 255 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 PRB3Q04118 309 aaPredicted RBP9.72□□□□□ -0.85
HCFC1-204ENST00000461098 AQP6Q13520 282 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 CDONQ4KMG0 1287 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 PATL1Q86TB9 770 aaKnown RBP9.72□□□□□ -0.85
HCFC1-204ENST00000461098 ANKRD42Q8N9B4 389 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 SGCDQ92629 289 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 PPA2Q9H2U2 334 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 UFSP2Q9NUQ7 469 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 MED31Q9Y3C7 131 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 FAM96BQ9Y3D0 163 aa9.72□□□□□ -0.85
HCFC1-204ENST00000461098 LOC100653049A0A140TA62 436 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 A0A1B0GW55 424 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 A6NIZ1 184 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 K7EIL1 84 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 LGALS8O00214 317 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DVL1O14640 695 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 KRT34O76011 436 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 OR5F1O95221 314 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 PTBP3O95758 552 aaKnown RBP9.71□□□□□ -0.86
HCFC1-204ENST00000461098 FBP1P09467 338 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DUX4L2P0CJ85 424 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DUX4L3P0CJ86 424 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DUX4L4P0CJ87 422 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DUX4L5P0CJ88 424 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DUX4L6P0CJ89 424 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DUX4L7P0CJ90 424 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 CTLA4P16410 223 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 ZNF26P17031 533 aaPredicted RBP9.71□□□□□ -0.86
HCFC1-204ENST00000461098 GABRA5P31644 462 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 KIR2DS4P43632 304 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 MTPNP58546 118 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 RAP1BP61224 184 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 RAP1AP62834 184 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 HIST1H3AP68431 136 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 CYP51A1Q16850 503 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 KRTAP27-1Q3LI81 207 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 MESTQ5EB52 335 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 HIST2H3PS2Q5TEC6 136 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 FOXB2Q5VYV0 432 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DUX4L9Q6RFH8 374 aaPredicted RBP9.71□□□□□ -0.86
HCFC1-204ENST00000461098 METAP1DQ6UB28 335 aaPredicted RBP9.71□□□□□ -0.86
HCFC1-204ENST00000461098 CCBE1Q6UXH8 406 aaPredicted RBP9.71□□□□□ -0.86
HCFC1-204ENST00000461098 HIST2H3AQ71DI3 136 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 CCDC80Q76M96 950 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 FAM90A1Q86YD7 464 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 LYG1Q8N1E2 194 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 LY6G5BQ8NDX9 201 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 OR5L1Q8NGL2 311 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 NPRL2Q8WTW4 380 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 APOBEC3DQ96AK3 386 aaPredicted RBP9.71□□□□□ -0.86
HCFC1-204ENST00000461098 BPIFA2Q96DR5 249 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 KAT8Q9H7Z6 458 aaKnown RBP9.71□□□□□ -0.86
HCFC1-204ENST00000461098 CNTD2Q9H8S5 307 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 RNF7Q9UBF6 113 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 DUX4Q9UBX2 424 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 ATPIF1Q9UII2 106 aa9.71□□□□□ -0.86
HCFC1-204ENST00000461098 RPUSD1Q9UJJ7 312 aaKnown RBP9.71□□□□□ -0.86
HCFC1-204ENST00000461098 SH3GLB1Q9Y371 365 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms