RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 FNDC8Q8TC99 324 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 C11orf40Q8WZ69 217 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ST6GALNAC6Q969X2 333 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ESAMQ96AP7 390 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TMEM45BQ96B21 275 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 KLHL29Q96CT2 875 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 PHF21BQ96EK2 531 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 PDLIM5Q96HC4 596 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TECTBQ96PL2 329 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 MTERF1Q99551 399 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ARHGDIGQ99819 225 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 EGFL8Q99944 293 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 CCDC28BQ9BUN5 200 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 FRMD8P1Q9BZ68 369 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 FAM234AQ9H0X4 552 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 GID8Q9NWU2 228 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 ADPRHL2Q9NX46 363 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 MRPL39Q9NYK5 338 aaKnown RBP3.83□□□□□ -1.8
SDCBP-205ENST00000447267 TAS2R7Q9NYW3 318 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 BAG5Q9UL15 447 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 SLC9A8Q9Y2E8 581 aa3.83□□□□□ -1.8
SDCBP-205ENST00000447267 MAGEA13PA6NCF6 341 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 CFAP73A6NFT4 308 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 PCP4L1A6NKN8 68 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 OR10H3O60404 316 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 PLOD3O60568 738 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 IFNA14P01570 189 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 ALPLP05186 524 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 LIPFP07098 398 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 PATE4P0C8F1 98 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 ACADSP16219 412 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 ATP6V1C1P21283 382 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 TACR3P29371 465 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 PIK3CBP42338 1070 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 KRT6CP48668 564 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 CEBPDP49716 269 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 SUMO3P55854 103 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 TAS2R39P59534 338 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 SUMO2P61956 95 aaKnown RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 H3F3AP84243 136 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 SLC29A2Q14542 456 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 SLC17A1Q14916 467 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 TSNQ15631 228 aaKnown RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 SLC18A3Q16572 532 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 AARDQ4LEZ3 155 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 FAM209BQ5JX69 171 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 SPATA46Q5T0L3 261 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 GRHL2Q6ISB3 625 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 MZT2BQ6NZ67 158 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 MZT2AQ6P582 158 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 BAIAP2L2Q6UXY1 529 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 TRPM8Q7Z2W7 1104 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 OR2W3Q7Z3T1 314 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 ABHD12BQ7Z5M8 362 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 PTOV1Q86YD1 416 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 CDH26Q8IXH8 852 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 KLHL30-AS1Q8NEE0 82 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 OR52H1Q8NGJ2 320 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 CLHC1Q8NHS4 586 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 RFWD2Q8NHY2 731 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 ZNF420Q8TAQ5 688 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 ENKURQ8TC29 256 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 NPRL2Q8WTW4 380 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 PIK3R3Q92569 461 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 UBE2E3Q969T4 207 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 SPSB4Q96A44 273 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 ATP6V1G3Q96LB4 118 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 CENPKQ9BS16 269 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 LMF2Q9BU23 707 aaKnown RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 C9orf16Q9BUW7 83 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 OR11A1Q9GZK7 315 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 SIGLEC8Q9NYZ4 499 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 BFARQ9NZS9 450 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 ATP6V1HQ9UI12 483 aa3.82□□□□□ -1.8
SDCBP-205ENST00000447267 FAF1Q9UNN5 650 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-205ENST00000447267 A0A0G2JPF8 293 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 IGHV3-64DA0A0J9YX35 117 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 A0A1B0GWJ7 208 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 NCF1BA6NI72 391 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-205ENST00000447267 NKX6-3A6NJ46 265 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 NCF1CA8MVU1 366 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-205ENST00000447267 CENPBD1B2RD01 187 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 HNRNPCL3B7ZW38 293 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 UBXN8O00124 270 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 PHYHO14832 338 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 MAGEB3O15480 346 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 NDUFA2O43678 99 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 CLN5O75503 358 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 TIPRLO75663 272 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 SEMA3DO95025 777 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 PMS2P2O95744 297 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 IGHV3-13P01766 116 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 HMGN1P05114 100 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 GLAP06280 429 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 KLK1P06870 262 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 ZSCAN5DPP0CG00 497 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 HNRNPCL4P0DMR1 293 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 PSG1P11464 419 aa3.81□□□□□ -1.8
SDCBP-205ENST00000447267 NCF1P14598 390 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms