RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 UBE2SQ16763 222 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ALKBH6Q3KRA9 238 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 NKAIN1Q4KMZ8 207 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 TTC19Q6DKK2 380 aaPredicted RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 NANOGP8Q6NSW7 305 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 C1orf94Q6P1W5 598 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 TMEM220Q6QAJ8 160 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 TMEM107Q6UX40 140 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 THOC6Q86W42 341 aaKnown RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 TRIM69Q86WT6 500 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 CCDC50Q8IVM0 306 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ACOT4Q8N9L9 421 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 FAM83FQ8NEG4 500 aaPredicted RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 OR2L3Q8NG85 312 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 OR2G3Q8NGZ4 309 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ACTRT1Q8TDG2 376 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 EFHD2Q96C19 240 aaPredicted RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ZNF641Q96N77 438 aaPredicted RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 SLC38A2Q96QD8 506 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 TGS1Q96RS0 853 aaKnown RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ECSITQ9BQ95 431 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ZNF2Q9BSG1 426 aaPredicted RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 NDFIP1Q9BT67 221 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 C11orf49Q9H6J7 331 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ANKRA2Q9H9E1 313 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ZNF160Q9HCG1 818 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 POLE4Q9NR33 117 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 SIRT7Q9NRC8 400 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 PDP1Q9P0J1 537 aaPredicted RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 GCNT4Q9P109 453 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 ZMAT5Q9UDW3 170 aaKnown RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 CSDC2Q9Y534 153 aaKnown RBP2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 TIMM10BQ9Y5J6 103 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 COMMD3-BMI1R4GMX3 469 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 FAM208BQ5VWN6 2430 aa2.29□□□□□ -2.04
AC003001.1-201ENST00000443247 SIP14410 1827 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 FAM186AA6NE01 2351 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CEMIPQ8WUJ3 1361 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 MED23Q9ULK4 1368 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 UBN2Q6ZU65 1347 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CCL15-CCL14A0A0B4J2E2 113 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 TCRBV9S1A1TA0A576 114 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 SUPT3HB4E1H0 165 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 C9JVG2 144 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 GOLGA8TH3BQL2 631 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 HAS3O00219 553 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 BET1O15155 118 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 POLR3GO15318 223 aaPredicted RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 PRKAB2O43741 272 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 FLOT1O75955 427 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 ATP5LO75964 103 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CLDN9O95484 217 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 FTH1P02794 183 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 MCF2P10911 925 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 ZNF14P17017 642 aaPredicted RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 ZNF30P17039 623 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CD9P21926 228 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CHMLP26374 656 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 OTX1P32242 354 aaPredicted RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CRYBB2P43320 205 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 RPS5P46782 204 aaKnown RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CSNK1EP49674 416 aaKnown RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 DUSP3P51452 185 aaPredicted RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 ATP1B3P54709 279 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 FGF8P55075 233 aaPredicted RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 RGS8P57771 180 aaPredicted RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 HMGCS1Q01581 520 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 OGDHQ02218 1023 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 LIPEQ05469 1076 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 PDIA2Q13087 525 aaKnown RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 DNAJC3Q13217 504 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 GK3PQ14409 553 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CHRNA6Q15825 494 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CCL15Q16663 113 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 SLC25A34Q6PIV7 304 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 ZNF836Q6ZNA1 936 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 C19orf35Q6ZS72 473 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 EIF3MQ7L2H7 374 aaKnown RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CENPQQ7L2Z9 268 aaPredicted RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 SPERTQ8NA61 448 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CD300LFQ8TDQ1 290 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 PHF10Q8WUB8 498 aaKnown RBP2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 MAIP1Q8WWC4 291 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 ELMO1Q92556 727 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 UFD1Q92890 307 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 SLC38A4Q969I6 547 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 OPTNQ96CV9 577 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 LINC00477Q96M19 166 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 SIKE1Q9BRV8 207 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CENPKQ9BS16 269 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 TRIM62Q9BVG3 475 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 ANKRD60Q9BZ19 345 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 HAUS4Q9H6D7 363 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 AZI2Q9H6S1 392 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CYP3A43Q9HB55 503 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 CTPS2Q9NRF8 586 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 KLHL28Q9NXS3 571 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 TMCO1Q9UM00 188 aa2.28□□□□□ -2.04
AC003001.1-201ENST00000443247 PACSIN2Q9UNF0 486 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms