RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PDCD1Q15116 288 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 PRR27Q6MZM9 219 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 GOT1L1Q8NHS2 421 aaPredicted RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 SRPK3Q9UPE1 567 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 LAMP3Q9UQV4 416 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 NUMA1Q14980 2115 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 OR2W5A6NFC9 320 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 YKT6O15498 198 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 ZNF749O43361 778 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 FGF17O60258 216 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 PNPP00491 289 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 CLEC3BP05452 202 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 IGSF11Q5DX21 431 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 KIAA1958Q8N8K9 716 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 FAM122AQ96E09 287 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 ZNF251Q9BRH9 671 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 PLEKHF2Q9H8W4 249 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 GPR84Q9NQS5 396 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 FAM96BQ9Y3D0 163 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 RGPD1P0DJD0 1748 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 ZNF891A8MT65 544 aaPredicted RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 H3BP45 60 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 F11P03951 625 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 CD37P11049 281 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 PCBP4P57723 403 aaKnown RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 MZT1Q08AG7 82 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 SLC43A2Q8N370 569 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 TMEFF2Q9UIK5 374 aaPredicted RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 HTRA3P83110 453 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 CDK5R1Q15078 307 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 DOK3Q7L591 496 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 MRPL43Q8N983 215 aaKnown RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 PHYHIPQ92561 330 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 LINC00052Q96N35 136 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 SLC46A1Q96NT5 459 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 STACQ99469 402 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 CHST6Q9GZX3 395 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 ESRP2Q9H6T0 727 aaKnown RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 MED29Q9NX70 200 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 GAR1Q9NY12 217 aaKnown RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 SLCO1B1Q9Y6L6 691 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 TMEM267Q0VDI3 215 aaPredicted RBP10.95□□□□□ -0.66
UBR4-205ENST00000417040 SMUG1Q53HV7 270 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 C17orf78Q8N4C9 275 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 SMIM7Q9BQ49 75 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 ZDHHC5Q9C0B5 715 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 CHRNA9Q9UGM1 479 aa10.95□□□□□ -0.66
UBR4-205ENST00000417040 GSK3AP49840 483 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 UBE2G1P62253 170 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 SLC38A9Q8NBW4 561 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 GJC3Q8NFK1 279 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 ZC3HAV1LQ96H79 300 aaKnown RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 PSENENQ9NZ42 101 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 TMEM184BQ9Y519 407 aaPredicted RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 ZNF814B7Z6K7 855 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 SPINK4O60575 86 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 PRPH2P23942 346 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CDAP32320 146 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 H3F3AP84243 136 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 MIDNQ504T8 468 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 POMT2Q9UKY4 750 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 NID1P14543 1247 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 RPL11P62913 178 aaKnown RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 C11orf87Q6NUJ2 197 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 GLDNQ6ZMI3 551 aaPredicted RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 PINX1Q96BK5 328 aaKnown RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 SEH1LQ96EE3 360 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 C2orf50Q96LR7 162 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 OR8B4Q96RC9 309 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 PBOV1Q9GZY1 135 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 TBC1D29Q9UFV1 150 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 BOKQ9UMX3 212 aaPredicted RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 PRELID3BQ9Y3B1 194 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 A0A096LPE4 126 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 A0A1W2PPZ6 126 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 GFYI3L273 518 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CHEK1O14757 476 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CT45A6P0DMU7 189 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CT45A5P0DMU8 189 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CT45A7P0DMV0 189 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CT45A8P0DMV1 189 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CT45A9P0DMV2 189 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 ADRA2CP18825 462 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 BMP5P22003 454 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 DCDP81605 110 aaKnown RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 CT45A2Q5DJT8 189 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CT45A1Q5HYN5 189 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 NCR3LG1Q68D85 454 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 OR13H1Q8NG92 308 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 CT45A3Q8NHU0 189 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 RDH5Q92781 318 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 STRAPQ9Y3F4 350 aaKnown RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 LOC102724200A0A096LPH7 203 aaPredicted RBP10.94□□□□□ -0.66
UBR4-205ENST00000417040 A0A1W2PNV4 684 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 PRAMEF25A6NGN4 478 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 IDSB3KWA1 339 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 DIO1P49895 249 aa10.94□□□□□ -0.66
UBR4-205ENST00000417040 HLXQ14774 488 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms