RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 RANBP1P43487 201 aa16.7■□□□□ 0.26
USP39-202ENST00000409025 CCL11P51671 97 aa16.7■□□□□ 0.26
USP39-202ENST00000409025 SERPINA12Q8IW75 414 aa16.7■□□□□ 0.26
USP39-202ENST00000409025 OR51D1Q8NGF3 324 aa16.7■□□□□ 0.26
USP39-202ENST00000409025 OR8B12Q8NGG6 310 aa16.7■□□□□ 0.26
USP39-202ENST00000409025 OR51E1Q8TCB6 317 aa16.7■□□□□ 0.26
USP39-202ENST00000409025 YIPF5Q969M3 257 aa16.7■□□□□ 0.26
USP39-202ENST00000409025 MCTS1Q9ULC4 181 aaKnown RBP16.7■□□□□ 0.26
USP39-202ENST00000409025 SLC5A6Q9Y289 635 aa16.7■□□□□ 0.26
USP39-202ENST00000409025 IGKV3D-15A0A087WSY6 115 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 A0A1B0GTI1 187 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 FAM240BA0A1B0GVZ2 78 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 BOLA2-SMG1P6H3BVE0 249 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 SULT1B1O43704 296 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 ACTL6AO96019 429 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 SLC2A1P11166 492 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 DGCR2P98153 550 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 CCDC92Q53HC0 331 aaPredicted RBP16.69■□□□□ 0.26
USP39-202ENST00000409025 ELFN2Q5R3F8 820 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 RIPPLY2Q5TAB7 128 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 FAM166AQ6J272 317 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 FAM57BQ71RH2 274 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 LINGO2Q7L985 606 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 COMMD2Q86X83 199 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 NKAIN3Q8N8D7 197 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 FAM3DQ96BQ1 224 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 TMEM38BQ9NVV0 291 aa16.69■□□□□ 0.26
USP39-202ENST00000409025 NOSIPQ9Y314 301 aaKnown RBP16.69■□□□□ 0.26
USP39-202ENST00000409025 TFECO14948 347 aaPredicted RBP16.68■□□□□ 0.26
USP39-202ENST00000409025 ITGB2P05107 769 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 CST2P09228 141 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 CD3GP09693 182 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 CD37P11049 281 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 HTR2CP28335 458 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 GNALP38405 381 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 POU3F4P49335 361 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 SPOCK1Q08629 439 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 RNASE12Q5GAN4 147 aaKnown RBP16.68■□□□□ 0.26
USP39-202ENST00000409025 TMEM69Q5SWH9 247 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 PLET1Q6UQ28 207 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 PRSS45Q7RTY3 260 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 ABHD12BQ7Z5M8 362 aaPredicted RBP16.68■□□□□ 0.26
USP39-202ENST00000409025 DUSP18Q8NEJ0 188 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 OR51A2Q8NGJ7 313 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 OR1J2Q8NGS2 313 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 C15orf40Q8WUR7 153 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 SMIM4Q8WVI0 70 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 ALKBH3Q96Q83 286 aaPredicted RBP16.68■□□□□ 0.26
USP39-202ENST00000409025 EMC3Q9P0I2 261 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 LOC100289279A0A1B0GTE1 492 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 APOC1P02654 83 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 WT1P19544 449 aaPredicted RBP16.68■□□□□ 0.26
USP39-202ENST00000409025 TNFSF10P50591 281 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 CARTPTQ16568 116 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 C2orf76Q3KRA6 126 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 KRT74Q7RTS7 529 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 TOMM5Q8N4H5 51 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 OR6M1Q8NGM8 313 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 FOXRED1Q96CU9 486 aaPredicted RBP16.68■□□□□ 0.26
USP39-202ENST00000409025 FBXO17Q96EF6 278 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 PGAM5Q96HS1 289 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 PRRG4Q9BZD6 226 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 LDAHQ9H6V9 325 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 RNF121Q9H920 327 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 DLL3Q9NYJ7 618 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 PLEK2Q9NYT0 353 aa16.68■□□□□ 0.26
USP39-202ENST00000409025 DCDC2BA2VCK2 349 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 MRPL33O75394 65 aaKnown RBP16.67■□□□□ 0.26
USP39-202ENST00000409025 TPPPO94811 219 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 ZNF20P17024 532 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 CDK2P24941 298 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 BDKRB2P30411 391 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 DDOSTP39656 456 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 GPR176Q14439 515 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 CEACAM16Q2WEN9 425 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 SLC36A2Q495M3 483 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 GLYATL3Q5SZD4 288 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 AGAP6Q5VW22 663 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 JAGN1Q8N5M9 183 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 FDCSPQ8NFU4 85 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 OR5D14Q8NGL3 314 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 HPS1Q92902 700 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 ADAT3Q96EY9 351 aaPredicted RBP16.67■□□□□ 0.26
USP39-202ENST00000409025 FOXB1Q99853 325 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 EXO5Q9H790 373 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 GPR35Q9HC97 309 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 GPR84Q9NQS5 396 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 PARPBPQ9NWS1 579 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 CACNG2Q9Y698 323 aa16.67■□□□□ 0.26
USP39-202ENST00000409025 NCOA6Q14686 2063 aaPredicted RBP16.67■□□□□ 0.26
USP39-202ENST00000409025 F5H5K5 113 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 KRT33AO76009 404 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 MNDAP41218 407 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 PTH2RP49190 550 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 MRPS10P82664 201 aaKnown RBP16.66■□□□□ 0.26
USP39-202ENST00000409025 RTP5Q14D33 572 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 DOK3Q7L591 496 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 CHMP1BQ7LBR1 199 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 OR1M1Q8NGA1 313 aa16.66■□□□□ 0.26
USP39-202ENST00000409025 CHAC2Q8WUX2 184 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms