RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 HHLA2Q9UM44 414 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 NOP16Q9Y3C1 178 aaKnown RBP18.42■□□□□ 0.54
CLK3-202ENST00000395066 R4GMQ9 66 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 IGLV3-19P01714 112 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 SLC26A5P58743 744 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 PPIAP62937 165 aaKnown RBP18.42■□□□□ 0.54
CLK3-202ENST00000395066 CFHR1Q03591 330 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 C3orf33Q6P1S2 294 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 SLC29A4Q7RTT9 530 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 BOLLQ8N9W6 283 aaKnown RBP18.42■□□□□ 0.54
CLK3-202ENST00000395066 FOXQ1Q9C009 403 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 VSIG4Q9Y279 399 aa18.42■□□□□ 0.54
CLK3-202ENST00000395066 KLF2Q9Y5W3 355 aaPredicted RBP18.42■□□□□ 0.54
CLK3-202ENST00000395066 RHPN2P1A8MT19 583 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 MS4A18H0YCH9 400 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 FBLP22087 321 aaKnown RBP18.41■□□□□ 0.54
CLK3-202ENST00000395066 CD38P28907 300 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 MS4A18Q3C1V0 323 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 GRINAQ7Z429 371 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 SLC26A10Q8NG04 563 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 NUDCD2Q8WVJ2 157 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 NUDT22Q9BRQ3 303 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.41■□□□□ 0.54
CLK3-202ENST00000395066 PIGMQ9H3S5 423 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 IGHV1OR15-9A0A0B4J2B8 117 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 RNF222A6NCQ9 220 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 FADS1O60427 444 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 ATG12O94817 140 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 HLA-AP01891 365 aaKnown RBP18.41■□□□□ 0.54
CLK3-202ENST00000395066 ZNF823P16415 610 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 DLSTP36957 453 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 POU3F1Q03052 451 aaPredicted RBP18.41■□□□□ 0.54
CLK3-202ENST00000395066 SNTB1Q13884 538 aaKnown RBP18.41■□□□□ 0.54
CLK3-202ENST00000395066 PAN3Q58A45 887 aaKnown RBP18.41■□□□□ 0.54
CLK3-202ENST00000395066 CHST4Q8NCG5 386 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 OR1N1Q8NGS0 311 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 FGGYQ96C11 551 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 SPACA5Q96QH8 159 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 PTGES2Q9H7Z7 377 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 CNTD2Q9H8S5 307 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 SCPEP1Q9HB40 452 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 ZNF304Q9HCX3 659 aa18.41■□□□□ 0.54
CLK3-202ENST00000395066 FBXW4P57775 412 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 CDNFQ49AH0 187 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 ST7LQ8TDW4 575 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 DAZLQ92904 295 aaKnown RBP18.4■□□□□ 0.54
CLK3-202ENST00000395066 ZDHHC12Q96GR4 267 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 EDEM2Q9BV94 578 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 SLC39A1Q9NY26 324 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 PHF3Q92576 2039 aaKnown RBP18.4■□□□□ 0.54
CLK3-202ENST00000395066 TTLL8A6PVC2 850 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 FAM25EA8MYX2 175 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 H3BML4 177 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 ADAM10O14672 748 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 LDLRAD4O15165 306 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 GNALP38405 381 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 DMRTC1Q5HYR2 192 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 PAPD4Q6PIY7 484 aaKnown RBP18.4■□□□□ 0.54
CLK3-202ENST00000395066 UQCC3Q6UW78 93 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 ACOT7LQ6ZUV0 252 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 RHOUQ7L0Q8 258 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 PPP1R1CQ8WVI7 109 aa18.4■□□□□ 0.54
CLK3-202ENST00000395066 A0A1W2PQD3 144 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 FTCDNL1E5RQL4 147 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 H7C2Y5 167 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 FJX1Q86VR8 437 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 OR52N4Q8NGI2 321 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 MRGPRFQ96AM1 343 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 ZBTB8AQ96BR9 441 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 SLCO5A1Q9H2Y9 848 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 PCDHB10Q9UN67 800 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 PLEKHA6Q9Y2H5 1048 aa18.39■□□□□ 0.54
CLK3-202ENST00000395066 DISC1C4P0D8 188 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 ATP1B3P54709 279 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 CCDC157Q569K6 752 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 ZNF584Q8IVC4 421 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 TSTD1Q8NFU3 115 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 TSNAXQ99598 290 aaKnown RBP18.39■□□□□ 0.53
CLK3-202ENST00000395066 FAM117AQ9C073 453 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 NDRG3Q9UGV2 375 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 GDF2Q9UK05 429 aaPredicted RBP18.39■□□□□ 0.53
CLK3-202ENST00000395066 KCNK7Q9Y2U2 307 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 VPS13AQ96RL7 3174 aa18.39■□□□□ 0.53
CLK3-202ENST00000395066 OR14I1A6ND48 311 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 NPIPA5E9PKD4 350 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 H2AFB1P0C5Y9 115 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 FSTP19883 344 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 PNLIPRP2P54317 469 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 CXADRP78310 365 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 UNC119Q13432 240 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 TRAPPC6BQ86SZ2 158 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 SMRP1Q8NCR6 262 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 OR1S2Q8NGQ3 325 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 GAREM1Q9H706 876 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 NPIPA1Q9UND3 350 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 SLC5A6Q9Y289 635 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 RHBDD3Q9Y3P4 386 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 RTTNQ86VV8 2226 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 CNTRLQ7Z7A1 2325 aa18.38■□□□□ 0.53
CLK3-202ENST00000395066 A0A1W2PR77 199 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms