RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 GKN2Q86XP6 184 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 ZNF584Q8IVC4 421 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 OR1J1Q8NGS3 322 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 ADAD1Q96M93 576 aaKnown RBP13.16□□□□□ -0.3
TOP3B-201ENST00000357179 C20orf24Q9BUV8 137 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 TAF9BQ9HBM6 251 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 A0A087WUJ7 227 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 A0A1W2PPE2 198 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 SLC25A1P53007 311 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 RPS4XP62701 263 aaKnown RBP13.16□□□□□ -0.3
TOP3B-201ENST00000357179 DMWDQ09019 674 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 CLINT1Q14677 625 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 RASD2Q96D21 266 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 ULBP3Q9BZM4 244 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 LMAN2LQ9H0V9 348 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 PLA2G2EQ9NZK7 142 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 OR5AC2Q9NZP5 309 aa13.16□□□□□ -0.3
TOP3B-201ENST00000357179 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 BTBD17A6NE02 478 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 ZNF860A6NHJ4 632 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 DCTN6O00399 190 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 STK17BO94768 372 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 EML2O95834 649 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 PRPS1P60891 318 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 Q6ZRG5 221 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 OR52R1Q8NGF1 315 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 ZFYVE21Q9BQ24 234 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 A0A087X0M5 115 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 A0A1B0GX30 115 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 PLRG1O43660 514 aaKnown RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 SLC35E2P0CK97 266 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 HKR1P10072 659 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 AKR1C4P17516 323 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 RABIFP47224 123 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 PSG6Q00889 435 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 PMPCAQ10713 525 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 ZNHIT3Q15649 155 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 RPL7L1Q6DKI1 246 aaKnown RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 PSRC1Q6PGN9 363 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 PRSS35Q8N3Z0 413 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 BHLHE23Q8NDY6 225 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 ZNF563Q8TA94 476 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 FAM131CQ96AQ9 280 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 RAB33BQ9H082 229 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 DUSP15Q9H1R2 295 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 ZMAT3Q9HA38 289 aaKnown RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 SPACA1Q9HBV2 294 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 DOK5Q9P104 306 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 CA14Q9ULX7 337 aa13.15□□□□□ -0.3
TOP3B-201ENST00000357179 MRPS2Q9Y399 296 aaKnown RBP13.15□□□□□ -0.3
TOP3B-201ENST00000357179 ELOA3DA6NLF2 546 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 GJA4P35212 333 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 WASP42768 502 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 CD81P60033 236 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 GAMTQ14353 236 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ODF4Q2M2E3 257 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ELOA3BQ3SY89 546 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ZNF776Q68DI1 518 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 CA13Q8N1Q1 262 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ELOA3Q8NG57 546 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 OR10D4PQ8NGN7 298 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ROBO4Q8WZ75 1007 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 THRSPQ92748 146 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 RERGQ96A58 199 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ANKRD9Q96BM1 317 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 CCNL2Q96S94 520 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 NKX3-1Q99801 234 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 DOCK9Q9BZ29 2069 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 A0A0A6YYH2 397 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 A6NJ64 397 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 TAAR5O14804 337 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 CSTBP04080 98 aaKnown RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 PAX1P15863 534 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 SLC26A5P58743 744 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 RAB1AP62820 205 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 EIF2B1Q14232 305 aaKnown RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 PHF19Q5T6S3 580 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ASPHD2Q6ICH7 369 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 HIST2H3AQ71DI3 136 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 C19orf47Q8N9M1 422 aaKnown RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 UBAC2Q8NBM4 344 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 RNF128Q8TEB7 428 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 TCTN2Q96GX1 697 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 S100A13Q99584 98 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 DNAJB11Q9UBS4 358 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 IKZF2Q9UKS7 526 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 FLVCR1Q9Y5Y0 555 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 H0YGG7 62 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 NDUFA6P56556 154 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ARF3P61204 181 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 RASGEF1BQ0VAM2 473 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 TDGQ13569 410 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 RUNX3Q13761 415 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 SURF2Q15527 256 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-201ENST00000357179 ACTBL2Q562R1 376 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 TMEM268Q5VZI3 342 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 CDC20BQ86Y33 519 aa13.14□□□□□ -0.31
TOP3B-201ENST00000357179 PLPP7Q8NBV4 271 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms