RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 FOXJ2Q9P0K8 574 aa14.78□□□□□ -0.04
SAMM50-201ENST00000350028 CGGBP1Q9UFW8 167 aaPredicted RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 MRPS18BQ9Y676 258 aaKnown RBP14.78□□□□□ -0.04
SAMM50-201ENST00000350028 IGHV3-15A0A0B4J1V0 119 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 A0A0G2JMM0 328 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 A0A1B0GTI1 187 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 A0A1W2PPB8 328 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 A0A1W2PRS3 328 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 KIR3DP1A8MWS1 328 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 RGS13O14921 159 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 LDLRAD4O15165 306 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 PRAF2O60831 178 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 CNR1P21554 472 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 CTSSP25774 331 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 FAUP35544 74 aaKnown RBP14.77□□□□□ -0.05
SAMM50-201ENST00000350028 PRKXP51817 358 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 SSBP1Q04837 148 aaKnown RBP14.77□□□□□ -0.05
SAMM50-201ENST00000350028 FCN2Q15485 313 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 ADGRE4PQ86SQ3 457 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 YRDCQ86U90 279 aaKnown RBP14.77□□□□□ -0.05
SAMM50-201ENST00000350028 OR1M1Q8NGA1 313 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 OR5D14Q8NGL3 314 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 C20orf85Q9H1P6 137 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 OTOGLQ3ZCN5 2332 aa14.77□□□□□ -0.05
SAMM50-201ENST00000350028 LRRC3CA6NJW4 275 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 SULT1C2O00338 296 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 RER1O15258 196 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 DHHO43323 396 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 PEX14O75381 377 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 WDPCPO95876 746 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 CSF1P09603 554 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 ZNF806P0C7X5 589 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 ENPP1P22413 925 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 PRSS3P35030 304 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 DLSTP36957 453 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 GNALP38405 381 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 GZMKP49863 264 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 OC90Q02509 493 aaPredicted RBP14.76□□□□□ -0.05
SAMM50-201ENST00000350028 CDK10Q15131 360 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 ZNF813Q6ZN06 617 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 BIVMQ86UB2 503 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 ZIC4Q8N9L1 334 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 OR1J2Q8NGS2 313 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 THOC3Q96J01 351 aaKnown RBP14.76□□□□□ -0.05
SAMM50-201ENST00000350028 ZNF416Q9BWM5 594 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 SRXN1Q9BYN0 137 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 NELFAQ9H3P2 528 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 TMEM138Q9NPI0 162 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 STMN3Q9NZ72 180 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 PCDHGA1Q9Y5H4 931 aa14.76□□□□□ -0.05
SAMM50-201ENST00000350028 PHF3Q92576 2039 aaKnown RBP14.76□□□□□ -0.05
SAMM50-201ENST00000350028 A0A1W2PNU3 283 aaPredicted RBP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 KDM4BO94953 1096 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ERCC1P07992 297 aaPredicted RBP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 RAB6AP20340 208 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ZNF84P51523 738 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 CARD18P57730 90 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ZNF121P58317 390 aaPredicted RBP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 TMEM255AQ5JRV8 349 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 PHYHD1Q5SRE7 291 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ZNF529Q6P280 563 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 FGD2Q7Z6J4 655 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 C20orf196Q8IYI0 205 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ZNF283Q8N7M2 679 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 GJC3Q8NFK1 279 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 OR51E1Q8TCB6 317 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 GIMAP1Q8WWP7 306 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ADAT3Q96EY9 351 aaPredicted RBP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 SFXN2Q96NB2 322 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 UQCC2Q9BRT2 126 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 KCNK15Q9H427 330 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 TMEM9BQ9NQ34 198 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 FOXD3Q9UJU5 478 aaPredicted RBP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 RHBDD3Q9Y3P4 386 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 PCSK5Q92824 1860 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 KIAA1549Q9HCM3 1950 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 TERTO14746 1132 aaKnown RBP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 SMAD9O15198 467 aaKnown RBP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ALDOBP05062 364 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ZNF20P17024 532 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 RAB3AP20336 220 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 CX3CR1P49238 355 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 FAPQ12884 760 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 SF3B4Q15427 424 aaKnown RBP eCLIP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 SLC22A24Q8N4F4 322 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 OR8B12Q8NGG6 310 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 ZFP64Q9NPA5 681 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 PAQR5Q9NXK6 330 aaPredicted RBP14.75□□□□□ -0.05
SAMM50-201ENST00000350028 NKIRAS2Q9NYR9 191 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 RAB22AQ9UL26 194 aa14.75□□□□□ -0.05
SAMM50-201ENST00000350028 SDK2Q58EX2 2172 aa14.74□□□□□ -0.05
SAMM50-201ENST00000350028 RFPL3SP0C7P2 107 aa14.74□□□□□ -0.05
SAMM50-201ENST00000350028 CCL1P22362 96 aa14.74□□□□□ -0.05
SAMM50-201ENST00000350028 HIST1H3AP68431 136 aa14.74□□□□□ -0.05
SAMM50-201ENST00000350028 ENDOGQ14249 297 aaKnown RBP14.74□□□□□ -0.05
SAMM50-201ENST00000350028 ST3GAL2Q16842 350 aa14.74□□□□□ -0.05
SAMM50-201ENST00000350028 PCGF3Q3KNV8 242 aa14.74□□□□□ -0.05
SAMM50-201ENST00000350028 HIST2H3PS2Q5TEC6 136 aa14.74□□□□□ -0.05
SAMM50-201ENST00000350028 SLC25A25Q6KCM7 469 aa14.74□□□□□ -0.05
SAMM50-201ENST00000350028 HIST2H3AQ71DI3 136 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms