RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ZNF175Q9Y473 711 aa12.96□□□□□ -0.33
CXCL12-201ENST00000343575 SLC22A20A6NK97 555 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 ZNF724A8MTY0 619 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 NAT1P18440 290 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 CDAP32320 146 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 CSNK1A1P48729 337 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 PCK2Q16822 640 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 PLA1AQ53H76 456 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 C10orf128Q5T292 105 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 ZNF322Q6U7Q0 402 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 FAM180AQ6UWF9 173 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 CHMP1BQ7LBR1 199 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 RFT1Q96AA3 541 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 SNRNP40Q96DI7 357 aaKnown RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 INTS14Q96SY0 518 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 AIFM2Q9BRQ8 373 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 TTTY10Q9BZA0 68 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 CLEC4MQ9H2X3 399 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 INPP5EQ9NRR6 644 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 NUBP2Q9Y5Y2 271 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 NCOA6Q14686 2063 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 ZNF593O00488 134 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 GPR171O14626 319 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 FABP7O15540 132 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 ALOX5APP20292 161 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 MTNR1BP49286 362 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 CENPAP49450 140 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 OR12D2P58182 307 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 P2RY14Q15391 338 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 NUFIP2Q7Z417 695 aaKnown RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 GLB1L2Q8IW92 636 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 OR6N1Q8NGY5 312 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 OR6N2Q8NGY6 317 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 SPRYD4Q8WW59 207 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 RNF166Q96A37 237 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 SORCS2Q96PQ0 1159 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 C7orf50Q9BRJ6 194 aaKnown RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 PRRG4Q9BZD6 226 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 HDHD2Q9H0R4 259 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 CYSLTR2Q9NS75 346 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 KCNG2Q9UJ96 466 aa12.95□□□□□ -0.34
CXCL12-201ENST00000343575 NOSIPQ9Y314 301 aaKnown RBP12.95□□□□□ -0.34
CXCL12-201ENST00000343575 WNT11O96014 354 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 HLA-DQA2P01906 255 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 CTRB1P17538 263 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 CD53P19397 219 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 LAP3P28838 519 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 BLVRAP53004 296 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 RAB14P61106 215 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 ACTC1P68032 377 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 ACTA1P68133 377 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 GPR176Q14439 515 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 RNPS1Q15287 305 aaKnown RBP12.94□□□□□ -0.34
CXCL12-201ENST00000343575 GUSBP1Q15486 140 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 GRK1Q15835 563 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 KRTCAP3Q53RY4 240 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 TSPO2Q5TGU0 170 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 DNM1P34Q6PK57 102 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 PCSK4Q6UW60 755 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 FOXL2NBQ6ZUU3 175 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 SEM1Q6ZVN7 128 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.94□□□□□ -0.34
CXCL12-201ENST00000343575 KLHL36Q8N4N3 616 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 OTOSQ8NHW6 89 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 C11orf40Q8WZ69 217 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 INTS12Q96CB8 462 aaKnown RBP12.94□□□□□ -0.34
CXCL12-201ENST00000343575 DPAGT1Q9H3H5 408 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 CALHM2Q9HA72 323 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 MGAT4AQ9UM21 535 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 DOCK7Q96N67 2140 aa12.94□□□□□ -0.34
CXCL12-201ENST00000343575 E9PI62 339 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 DHHO43323 396 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 HRGP04196 525 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 ADAM8P78325 824 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
CXCL12-201ENST00000343575 RTL6Q6ICC9 239 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 OR4M2Q8NGB6 313 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 PHF21AQ96BD5 680 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 TRIB1Q96RU8 372 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 TM9SF2Q99805 663 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 ACTR6Q9GZN1 396 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 PPIL3Q9H2H8 161 aaKnown RBP12.93□□□□□ -0.34
CXCL12-201ENST00000343575 GHITMQ9H3K2 345 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 ASF1BQ9NVP2 202 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 RABL2AQ9UBK7 228 aaPredicted RBP12.93□□□□□ -0.34
CXCL12-201ENST00000343575 RABL2BQ9UNT1 228 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 SIRT4Q9Y6E7 314 aaPredicted RBP12.93□□□□□ -0.34
CXCL12-201ENST00000343575 A0A0A6YYJ9 748 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 AHRRA9YTQ3 701 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 PSMD9O00233 223 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 GABRPO00591 440 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 LRRTM2O43300 516 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 AGTR1P30556 359 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 FCN2Q15485 313 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 TRAM1Q15629 374 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 TP53I3Q53FA7 332 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 TEX30Q5JUR7 227 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 OR8H3Q8N146 312 aa12.93□□□□□ -0.34
CXCL12-201ENST00000343575 C9orf106Q8NAJ2 232 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms